RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 INPP5FQ9Y2H2 1132 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 FOXN3O00409 490 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 GNAT1P11488 350 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 MX2P20592 715 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 SEC24CP53992 1094 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 GIT2Q14161 759 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 MXD4Q14582 209 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 SGSM1Q2NKQ1 1148 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 HSP90AA5PQ58FG0 334 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 WDR35Q9P2L0 1181 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 DMGDHQ9UI17 866 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 GYS1P13807 737 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PRLRP16471 622 aa11□□□□□ -0.65
CTC1-202ENST00000449476 COPB2P35606 906 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SREBF1P36956 1147 aa11□□□□□ -0.65
CTC1-202ENST00000449476 CASP2P42575 452 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SLC12A1Q13621 1099 aa11□□□□□ -0.65
CTC1-202ENST00000449476 KYNUQ16719 465 aa11□□□□□ -0.65
CTC1-202ENST00000449476 GRAMD1BQ3KR37 738 aa11□□□□□ -0.65
CTC1-202ENST00000449476 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PDZD8Q8NEN9 1154 aa11□□□□□ -0.65
CTC1-202ENST00000449476 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 IGSF9BQ9UPX0 1349 aa11□□□□□ -0.65
CTC1-202ENST00000449476 A0A087X0B3 334 aa11□□□□□ -0.65
CTC1-202ENST00000449476 TRIM66O15016 1216 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PDGFRAP16234 1089 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SNRPFP62306 86 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 NOP14P78316 857 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SPATA21Q7Z572 469 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SCN4BQ8IWT1 228 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ATG4CQ96DT6 458 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PRMT6Q96LA8 375 aaPredicted RBP11□□□□□ -0.65
CTC1-202ENST00000449476 ACAP3Q96P50 834 aa11□□□□□ -0.65
CTC1-202ENST00000449476 MCEEQ96PE7 176 aa11□□□□□ -0.65
CTC1-202ENST00000449476 XPO6Q96QU8 1125 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 TAAR1Q96RJ0 339 aa11□□□□□ -0.65
CTC1-202ENST00000449476 FAM118BQ9BPY3 351 aa11□□□□□ -0.65
CTC1-202ENST00000449476 TARS2Q9BW92 718 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 UNC45AQ9H3U1 944 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ECT2Q9H8V3 914 aa11□□□□□ -0.65
CTC1-202ENST00000449476 GGT7Q9UJ14 662 aa11□□□□□ -0.65
CTC1-202ENST00000449476 CCDC195A0A1B0GUA6 201 aa11□□□□□ -0.65
CTC1-202ENST00000449476 CFAP73A6NFT4 308 aa11□□□□□ -0.65
CTC1-202ENST00000449476 KPNA7A9QM74 516 aa11□□□□□ -0.65
CTC1-202ENST00000449476 GOLGA8RI6L899 631 aa11□□□□□ -0.65
CTC1-202ENST00000449476 OCRLQ01968 901 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ANKRD20A4Q4UJ75 823 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ANKRD20A8PQ5CZ79 823 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
CTC1-202ENST00000449476 KIFC3Q9BVG8 833 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PACSIN1Q9BY11 444 aa11□□□□□ -0.65
CTC1-202ENST00000449476 GTF3C4Q9UKN8 822 aa11□□□□□ -0.65
CTC1-202ENST00000449476 CFAP69A5D8W1 941 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ASB14A6NK59 587 aa11□□□□□ -0.65
CTC1-202ENST00000449476 PIK3R2O00459 728 aa11□□□□□ -0.65
CTC1-202ENST00000449476 LMNAP02545 664 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 RFC1P35251 1148 aaPredicted RBP11□□□□□ -0.65
CTC1-202ENST00000449476 EPHB1P54762 984 aa11□□□□□ -0.65
CTC1-202ENST00000449476 COPS2P61201 443 aa11□□□□□ -0.65
CTC1-202ENST00000449476 AP1B1Q10567 949 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SMAD1Q15797 465 aaKnown RBP11□□□□□ -0.65
CTC1-202ENST00000449476 EFHC2Q5JST6 749 aa11□□□□□ -0.65
CTC1-202ENST00000449476 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
CTC1-202ENST00000449476 ZDHHC15Q96MV8 337 aa11□□□□□ -0.65
CTC1-202ENST00000449476 DONSONQ9NYP3 566 aa11□□□□□ -0.65
CTC1-202ENST00000449476 STOML1Q9UBI4 398 aa11□□□□□ -0.65
CTC1-202ENST00000449476 NEU2Q9Y3R4 380 aa11□□□□□ -0.65
CTC1-202ENST00000449476 SPATA31A6Q5VVP1 1343 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 PAMP19021 973 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 CDR2Q01850 454 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 NME3Q13232 169 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 EXT2Q93063 718 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTC1-202ENST00000449476 TRIM4Q9C037 500 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 FAM96AQ9H5X1 160 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
CTC1-202ENST00000449476 ARL2BPQ9Y2Y0 163 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 ZFXP17010 805 aaPredicted RBP10.99□□□□□ -0.65
CTC1-202ENST00000449476 TYK2P29597 1187 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 TSTA3Q13630 321 aaPredicted RBP10.99□□□□□ -0.65
CTC1-202ENST00000449476 PIGHQ14442 188 aaPredicted RBP10.99□□□□□ -0.65
CTC1-202ENST00000449476 SLC29A2Q14542 456 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 KIAA0895Q8NCT3 520 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 FSD1LQ9BXM9 530 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 KLC4Q9NSK0 619 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 SNX9Q9Y5X1 595 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 ASAP2O43150 1006 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 TRPA1O75762 1119 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 AKAP3O75969 853 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 TKFCQ3LXA3 575 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 FSCBQ5H9T9 825 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 STYK1Q6J9G0 422 aa10.99□□□□□ -0.65
CTC1-202ENST00000449476 PID1Q7Z2X4 250 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms