RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 KIF12Q96FN5 646 aa22.35■■□□□ 1.17
PTX4-203ENST00000447419 FAM213AQ9BRX8 229 aa22.35■■□□□ 1.17
PTX4-203ENST00000447419 EXOC1Q9NV70 894 aa22.35■■□□□ 1.17
PTX4-203ENST00000447419 USP25Q9UHP3 1055 aa22.35■■□□□ 1.17
PTX4-203ENST00000447419 CPSF3Q9UKF6 684 aaKnown RBP22.35■■□□□ 1.17
PTX4-203ENST00000447419 ADAM28Q9UKQ2 775 aa22.35■■□□□ 1.17
PTX4-203ENST00000447419 PPP2R3AQ06190 1150 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 STK4Q13043 487 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 SLFN12LQ6IEE8 588 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 FUT10Q6P4F1 479 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 FMR1NBQ8N0W7 255 aaPredicted RBP22.34■■□□□ 1.17
PTX4-203ENST00000447419 C3orf58Q8NDZ4 430 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 VN1R2Q8NFZ6 395 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 SCFD1Q8WVM8 642 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 FAM84AQ96KN4 292 aa22.34■■□□□ 1.17
PTX4-203ENST00000447419 NGRNQ9NPE2 291 aaKnown RBP22.34■■□□□ 1.17
PTX4-203ENST00000447419 BARX2Q9UMQ3 279 aaPredicted RBP22.34■■□□□ 1.17
PTX4-203ENST00000447419 PVALEFA0A1B0GWK0 134 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 TTC26A0AVF1 554 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 B3GAT3O94766 335 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 RPN1P04843 607 aaKnown RBP22.33■■□□□ 1.17
PTX4-203ENST00000447419 CTSAP10619 480 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 KCNE1P15382 129 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 PNOCQ13519 176 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 ALCAMQ13740 583 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 STXBP4Q6ZWJ1 553 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 EPM2AIP1Q7L775 607 aaPredicted RBP22.33■■□□□ 1.17
PTX4-203ENST00000447419 CEP57Q86XR8 500 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 PPP2R3CQ969Q6 453 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 STYXL1Q9Y6J8 313 aa22.33■■□□□ 1.17
PTX4-203ENST00000447419 TBX10O75333 385 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 GLP2RO95838 553 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 SOD2P04179 222 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 LTBRP36941 435 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 NDUFV1P49821 464 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 WNT7BP56706 349 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 SNW1Q13573 536 aaKnown RBP22.32■■□□□ 1.16
PTX4-203ENST00000447419 PTPN14Q15678 1187 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 DUSP6Q16828 381 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 JADE1Q6IE81 842 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 ARMCX5Q6P1M9 558 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 CRELD2Q6UXH1 353 aaPredicted RBP22.32■■□□□ 1.16
PTX4-203ENST00000447419 GLYCTKQ8IVS8 523 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 TMEM87AQ8NBN3 555 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 KIAA0895Q8NCT3 520 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 PABPC5Q96DU9 382 aaKnown RBP22.32■■□□□ 1.16
PTX4-203ENST00000447419 APOL5Q9BWW9 433 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 TMEM206Q9H813 350 aa22.32■■□□□ 1.16
PTX4-203ENST00000447419 TDRD15B5MCY1 1934 aaKnown RBP22.32■■□□□ 1.16
PTX4-203ENST00000447419 CLIC2O15247 247 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 NFICP08651 508 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 BRCC3P46736 316 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 DPYDQ12882 1025 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 UPP1Q16831 310 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 PDE12Q6L8Q7 609 aaKnown RBP22.31■■□□□ 1.16
PTX4-203ENST00000447419 KIAA1841Q6NSI8 718 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 ENGASEQ8NFI3 743 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 ZNF507Q8TCN5 953 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 HERC2P3Q9BVR0 1158 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 SLC38A7Q9NVC3 462 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 MAPK8IP1Q9UQF2 711 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.31■■□□□ 1.16
PTX4-203ENST00000447419 PODXLO00592 558 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 URODP06132 367 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 RPL17P18621 184 aaKnown RBP22.31■■□□□ 1.16
PTX4-203ENST00000447419 FAM160A1Q05DH4 1040 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 ADAM15Q13444 863 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 FAM171A1Q5VUB5 890 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 PRSS55Q6UWB4 352 aaPredicted RBP22.31■■□□□ 1.16
PTX4-203ENST00000447419 MRPL17Q9NRX2 175 aaKnown RBP22.31■■□□□ 1.16
PTX4-203ENST00000447419 COG5Q9UP83 839 aa22.31■■□□□ 1.16
PTX4-203ENST00000447419 CARNS1A5YM72 827 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 EIF3DO15371 548 aaKnown RBP eCLIP22.3■■□□□ 1.16
PTX4-203ENST00000447419 TGFB1I1O43294 461 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 GLUD2P49448 558 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 MRPS5P82675 430 aaKnown RBP22.3■■□□□ 1.16
PTX4-203ENST00000447419 POSTNQ15063 836 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 CTC1Q2NKJ3 1217 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 RTP2Q5QGT7 225 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 CD300LGQ6UXG3 332 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 EFHBQ8N7U6 833 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 RIN2Q8WYP3 895 aaPredicted RBP22.3■■□□□ 1.16
PTX4-203ENST00000447419 ASB2Q96Q27 587 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 PLEKHA5Q9HAU0 1116 aa22.3■■□□□ 1.16
PTX4-203ENST00000447419 SF3B1O75533 1304 aaKnown RBP eCLIP22.29■■□□□ 1.16
PTX4-203ENST00000447419 CLASP2O75122 1294 aaKnown RBP22.29■■□□□ 1.16
PTX4-203ENST00000447419 EFEMP2O95967 443 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 CNPP09543 421 aaKnown RBP22.29■■□□□ 1.16
PTX4-203ENST00000447419 CYP2J2P51589 502 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
PTX4-203ENST00000447419 KYAT1Q16773 422 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 DCLRE1AQ6PJP8 1040 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 RNF168Q8IYW5 571 aaPredicted RBP22.29■■□□□ 1.16
PTX4-203ENST00000447419 RDH13Q8NBN7 331 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 AGPAT3Q9NRZ7 376 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 CLEC1BQ9P126 229 aa22.29■■□□□ 1.16
PTX4-203ENST00000447419 PPEF2O14830 753 aa22.28■■□□□ 1.16
PTX4-203ENST00000447419 GARTP22102 1010 aa22.28■■□□□ 1.16
PTX4-203ENST00000447419 CBWD2Q8IUF1 395 aa22.28■■□□□ 1.16
PTX4-203ENST00000447419 SMYD4Q8IYR2 804 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms