RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CXCL12P48061 93 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 ADAMTSL4Q6UY14 1074 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 SPATA18Q8TC71 538 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 SSH1Q8WYL5 1049 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 TBC1D5Q92609 795 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 CHMP4CQ96CF2 233 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 RMDN3Q96TC7 470 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 CCDC86Q9H6F5 360 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 SRA1Q9HD15 236 aaKnown RBP3.8□□□□□ -1.8
PMS1-215ENST00000447232 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 FAM13BQ9NYF5 915 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 KCNK4Q9NYG8 393 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 DKK4Q9UBT3 224 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 PPME1Q9Y570 386 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 CCDC171Q6TFL3 1326 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 FBN2P35556 2912 aa3.8□□□□□ -1.8
PMS1-215ENST00000447232 WDR81Q562E7 1941 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DOCK6Q96HP0 2047 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 C2CD3Q4AC94 2353 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 LNP1A1A4G5 178 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 H0Y626 953 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CDX4O14627 284 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 PRDM1O75626 825 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 TRIM16O95361 564 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CA8P35219 290 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ADD2P35612 726 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 SLC16A2P36021 539 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CCR10P46092 362 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CEP68Q76N32 757 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DDX53Q86TM3 631 aaKnown RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 WDR5BQ86VZ2 330 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 MAP4K3Q8IVH8 894 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CACTIN-AS1Q8N1I8 211 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 GALNT11Q8NCW6 608 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DEFB124Q8NES8 71 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ADAM2Q99965 735 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ATP6V0A4Q9HBG4 840 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 MAN1C1Q9NR34 630 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 SMC4Q9NTJ3 1288 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 TUBE1Q9UJT0 475 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 FNDC3AQ9Y2H6 1198 aaKnown RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 TRPV2Q9Y5S1 764 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 SLC4A4Q9Y6R1 1079 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 NOTCH2Q04721 2471 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CAPN8A6NHC0 703 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 INPPL1O15357 1258 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CNPP09543 421 aaKnown RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 NOVP48745 357 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ATP11AP98196 1134 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ITPR3Q14573 2671 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 Q6ZS46 218 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 GET4Q7L5D6 327 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 CACNA2D4Q7Z3S7 1137 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 KBTBD6Q86V97 674 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ZNF444Q8N0Y2 327 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 SPEM1Q8N4L4 309 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 CHCHD4Q8N4Q1 142 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ZNF513Q8N8E2 541 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 TMEM87AQ8NBN3 555 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DCAF4Q8WV16 495 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 SMG7Q92540 1137 aaKnown RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 TMEM169Q96HH4 297 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ZC3H10Q96K80 434 aaKnown RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 VN1R3Q9BXE9 311 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 MUC3BQ9H195 1237 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DOCK5Q9H7D0 1870 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 MLXIPQ9HAP2 919 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 PXMP2Q9NR77 195 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 HEBP1Q9NRV9 189 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 ZNF215Q9UL58 517 aaPredicted RBP3.79□□□□□ -1.8
PMS1-215ENST00000447232 RNF112Q9ULX5 631 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 PTPRQQ9UMZ3 2332 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 DOPEY2Q9Y3R5 2298 aa3.79□□□□□ -1.8
PMS1-215ENST00000447232 EML5Q05BV3 1969 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 MYH7P12883 1935 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 MTCL1Q9Y4B5 1905 aaKnown RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 ATMQ13315 3056 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 NT5C1B-RDH14C9J2C7 533 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 LINC01387J3KSC0 135 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 RFPL2O75678 378 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 KIF4AO95239 1232 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 WISP1O95388 367 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 GNAI3P08754 354 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CHRNB1P11230 501 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 IBSPP21815 317 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 METAP2P50579 478 aaKnown RBP eCLIP3.78□□□□□ -1.8
PMS1-215ENST00000447232 BCAR1P56945 870 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 HYAL2Q12891 473 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 DSC3Q14574 896 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TMEM266Q2M3C6 531 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 TTC39BQ5VTQ0 682 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 GIMAP6Q6P9H5 292 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 PCSK4Q6UW60 755 aa3.78□□□□□ -1.8
PMS1-215ENST00000447232 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.8
PMS1-215ENST00000447232 MTSS1LQ765P7 747 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms