RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 URODP06132 367 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 SLFN14P0C7P3 912 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 IL9P15248 144 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 KCNE1P15382 129 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 ADSSP30520 456 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 SYKP43405 635 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 GLUD2P49448 558 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 ACOT2P49753 483 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 KCNC3Q14003 757 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 BMS1Q14692 1282 aaKnown RBP16.17■□□□□ 0.18
HDAC4-204ENST00000446876 PTCRAQ6ISU1 281 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-204ENST00000446876 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 UNC13DQ70J99 1090 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 C3orf58Q8NDZ4 430 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 ZSWIM2Q8NEG5 633 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 ADAMTS19Q8TE59 1207 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 PAGE5Q96GU1 130 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 MSLNLQ96KJ4 702 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
HDAC4-204ENST00000446876 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 HCFC2Q9Y5Z7 792 aa16.17■□□□□ 0.18
HDAC4-204ENST00000446876 VCANP13611 3396 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 FAM237AA0A1B0GTK4 181 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 TTC26A0AVF1 554 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 I3L4J1 428 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 LILRB3O75022 631 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 CNPP09543 421 aaKnown RBP16.16■□□□□ 0.18
HDAC4-204ENST00000446876 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 PPP2R3AQ06190 1150 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 FAM26FQ5R3K3 315 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 CD300LGQ6UXG3 332 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 SYCP3Q8IZU3 236 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 POMGNT1Q8WZA1 660 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 KLHL5Q96PQ7 755 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 APOL5Q9BWW9 433 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 RPF1Q9H9Y2 349 aaKnown RBP16.16■□□□□ 0.18
HDAC4-204ENST00000446876 MRPL17Q9NRX2 175 aaKnown RBP16.16■□□□□ 0.18
HDAC4-204ENST00000446876 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 CPSF3Q9UKF6 684 aaKnown RBP16.16■□□□□ 0.18
HDAC4-204ENST00000446876 AGO2Q9UKV8 859 aaKnown RBP16.16■□□□□ 0.18
HDAC4-204ENST00000446876 EXOC7Q9UPT5 735 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 IRAK3Q9Y616 596 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 STYXL1Q9Y6J8 313 aa16.16■□□□□ 0.18
HDAC4-204ENST00000446876 SF3B1O75533 1304 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■■ 138.4
HDAC4-204ENST00000446876 A0A0C4DFX4 3053 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 GRXCR2A6NFK2 248 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 PODXLO00592 558 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 KLRC4O43908 158 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 B3GAT3O94766 335 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 EPCAMP16422 314 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 HOXD13P35453 343 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 BRCC3P46736 316 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 DSG1Q02413 1049 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 EHHADHQ08426 723 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 ALCAMQ13740 583 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 UPP1Q16831 310 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 KIAA0319Q5VV43 1072 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 SLFN12LQ6IEE8 588 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 KIAA1841Q6NSI8 718 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 PRSS55Q6UWB4 352 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-204ENST00000446876 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 TMEM87AQ8NBN3 555 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
HDAC4-204ENST00000446876 SAAL1Q96ER3 474 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 KIF12Q96FN5 646 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 CBWD1Q9BRT8 395 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 SLC38A7Q9NVC3 462 aa16.15■□□□□ 0.18
HDAC4-204ENST00000446876 GOLGA8IPA6NC78 632 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 GOLGA8JA6NMD2 632 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 DLL1O00548 723 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 TEX28O15482 410 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 MBTPS2O43462 519 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 NFICP08651 508 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 RPL17P18621 184 aaKnown RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 KLRC2P26717 231 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 KYAT1Q16773 422 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 USP41Q3LFD5 358 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 JADE1Q6IE81 842 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 ANKRD54Q6NXT1 300 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 CRELD2Q6UXH1 353 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 EPM2AIP1Q7L775 607 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 CEP57Q86XR8 500 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 FEZF2Q8TBJ5 459 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 NOC3LQ8WTT2 800 aaKnown RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 SLC22A17Q8WUG5 538 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 UROC1Q96N76 676 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 UHRF1Q96T88 793 aaPredicted RBP16.14■□□□□ 0.17
HDAC4-204ENST00000446876 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
HDAC4-204ENST00000446876 PCIF1Q9H4Z3 704 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms