RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CEP19Q96LK0 163 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ADAM33Q9BZ11 813 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RAPGEF6Q8TEU7 1601 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 POTEMA6NI47 508 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PYGLP06737 847 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ZNF786Q8N393 782 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ARHGEF38Q9NXL2 777 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ZNF212Q9UDV6 495 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RNF225M0QZC1 329 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 SHBGP04278 402 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ZNF200P98182 395 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 TTC33Q6PID6 262 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 SIX5Q8N196 739 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 KIAA0391O15091 583 aaKnown RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 LCA5LO95447 670 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GSNP06396 782 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 MMP13P45452 471 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 OCRLQ01968 901 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GIPC3Q8TF64 312 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 FANCAO15360 1455 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GSG1L2A8MUP6 293 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 SLC5A4Q9NY91 659 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 CRB1P82279 1406 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PRPSAP2O60256 369 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 IL2RBP14784 551 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 CBX3Q13185 183 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 C16orf72Q14CZ0 275 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RTCBQ9Y3I0 505 aaKnown RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 SNX5Q9Y5X3 404 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 DGKIO75912 1065 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RAG1P15918 1043 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PTENP60484 403 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ADNPQ9H2P0 1102 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 MYO3BQ8WXR4 1341 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 CNPY1Q3B7I2 92 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 EDRF1Q3B7T1 1238 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 DPP8Q6V1X1 898 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 CAAP1Q9H8G2 361 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 DNAJC13O75165 2243 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 ZNF609O15014 1411 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 CDK12Q9NYV4 1490 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 ZNF268Q14587 947 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 PIGWQ7Z7B1 504 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 E2F7Q96AV8 911 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 PCIF1Q9H4Z3 704 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 DKK3Q9UBP4 350 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 UPP2O95045 317 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 TRIM49P0CI25 452 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 TRIM49CP0CI26 452 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 PYGBP11216 843 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 NANOGNBQ7Z5D8 188 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 TUBA8Q9NY65 449 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 A0A0A6YYK5 440 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 EFTUD2Q15029 972 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■■■□ 21.8
SMG1-202ENST00000446231 GSTA3Q16772 222 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 ASPRV1Q53RT3 343 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 RIBC1Q8N443 379 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 MAST1Q9Y2H9 1570 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SH3BP5O60239 455 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 KLF6Q99612 283 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 SYCE1LA8MT33 242 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 NLRP11P59045 1033 aaKnown RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 NLRP10Q86W26 655 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SH3TC2Q8TF17 1288 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 UVRAGQ9P2Y5 699 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SUGT1Q9Y2Z0 365 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 HBS1LQ9Y450 684 aaKnown RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 C16orf96A6NNT2 1141 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 ASNA1O43681 348 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 IGBP1P78318 339 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 A0A087WXM4 84 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SRGAP2CP0DJJ0 459 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 SRGAP2BP0DMP2 458 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 NR1H2P55055 460 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 EBF2Q9HAK2 575 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 USP17L8P0C7I0 530 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 STKLD1Q8NE28 680 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 COA7Q96BR5 231 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 PIK3R2O00459 728 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 VCAM1P19320 739 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 C11orf91Q3C1V1 193 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 LOC100653049A0A140TA62 436 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 CYP26A1O43174 497 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 KRT34O76011 436 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
SMG1-202ENST00000446231 MTRQ99707 1265 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 OSBPL7Q9BZF2 842 aa8.29□□□□□ -1.08
SMG1-202ENST00000446231 TMEM206Q9H813 350 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms