RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MOCS1Q9NZB8 636 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 FAM30AQ9NZY2 134 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 CALCOCO1Q9P1Z2 691 aa5.61□□□□□ -1.51
HMGB1P48-201ENST00000446155 KLRG2A4D1S0 409 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 TBKBP1A7MCY6 615 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 TEX33O43247 280 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 AP1G1O43747 822 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 SH3BP5O60239 455 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 IPO13O94829 963 aaKnown RBP5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 PGS1Q32NB8 556 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 DACT2Q5SW24 774 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 ERICH6BQ5W0A0 696 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 C11orf96Q7Z7L8 435 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 XYLT1Q86Y38 959 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 CLIP3Q96DZ5 547 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 C1GALT1C1Q96EU7 318 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 FAM89AQ96GI7 184 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 TMX3Q96JJ7 454 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 CLPTM1LQ96KA5 538 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 C8orf49Q96NF6 230 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 MAP3K14Q99558 947 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 ARPC5LQ9BPX5 153 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 SMPD4Q9NXE4 827 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 OBP2AQ9NY56 170 aa5.6□□□□□ -1.51
HMGB1P48-201ENST00000446155 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 CAPN14A8MX76 684 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 VSTM5A8MXK1 200 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 NT5C1B-RDH14C9J2C7 533 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 H3BML4 177 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 SLC16A6O15403 523 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 SNRPA1P09661 255 aaKnown RBP5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 GNAT2P19087 354 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 MAGEA10P43363 369 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 MAP2K6P52564 334 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 HK3P52790 923 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 CLRN1P58418 232 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 PURAQ00577 322 aaKnown RBP5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 PTH1RQ03431 593 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 HSP90AB4PQ58FF6 505 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 Q6ZRM9 215 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 RGMAQ96B86 450 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 LRGUKQ96M69 825 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 MYOCQ99972 504 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 CPPED1Q9BRF8 314 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 MRI1Q9BV20 369 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 KLC2Q9H0B6 622 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 TESMINQ9Y4I5 508 aa5.59□□□□□ -1.51
HMGB1P48-201ENST00000446155 CCDC189A1A4V9 331 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 LRRC14BA6NHZ5 514 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 GRXCR1A8MXD5 290 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 HMGB1P1B2RPK0 211 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 MFAP3LO75121 409 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ALDH2P05091 517 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 RPLP2P05387 115 aaKnown RBP5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZNF20P17024 532 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 SCNN1GP51170 649 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZNF280AP59817 542 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ADAM17P78536 824 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZRSR2Q15696 482 aaKnown RBP5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 MINDY4Q4G0A6 757 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 HS1BP3Q53T59 392 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 METRNLQ641Q3 311 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 SYT12Q8IV01 421 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 GRAMD1CQ8IYS0 662 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 MB21D1Q8N884 522 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ACO2Q99798 780 aaKnown RBP5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 NDC1Q9BTX1 674 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 PRDM11Q9NQV5 511 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 CLCA2Q9UQC9 943 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 TCAF1Q9Y4C2 921 aa5.58□□□□□ -1.52
HMGB1P48-201ENST00000446155 ERC2O15083 957 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 FOSP01100 380 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 RAP2AP10114 183 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 TRIM27P14373 513 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 ATP5JP18859 108 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 MALP21145 153 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 SLC6A4P31645 630 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 HHEXQ03014 270 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 NOGQ13253 232 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 SNAPC2Q13487 334 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 KHDC1Q4VXA5 237 aaKnown RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 C10orf62Q5T681 223 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 THEMIS2Q5TEJ8 643 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 CYB5RLQ6IPT4 315 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 ZNF585AQ6P3V2 769 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 OVCH2Q7RTZ1 564 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 SGMS1Q86VZ5 419 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 DENND1CQ8IV53 801 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 C3orf20Q8ND61 904 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 PPP1R35Q8TAP8 253 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 ATXN2LQ8WWM7 1075 aaKnown RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 TFAP2CQ92754 450 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 MNTQ99583 582 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 LRFN3Q9BTN0 628 aa5.57□□□□□ -1.52
HMGB1P48-201ENST00000446155 C11orf54Q9H0W9 315 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms