RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TCEANC2Q96MN5 208 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SIRT3Q9NTG7 399 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 TOR4AQ9NXH8 423 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 ABCC8Q09428 1581 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 GAPVD1Q14C86 1478 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 URB2Q14146 1524 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 PRR5-ARHGAP8B1AHC4 643 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 DDX3XO00571 662 aaKnown RBP eCLIP4.28□□□□□ -1.72
UBR3-206ENST00000444475 MAGEB3O15480 346 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 PHF2O75151 1096 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 PDHA1P08559 390 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 VAV1P15498 845 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 S100A5P33763 92 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 IL15P40933 162 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 CPT1AP50416 773 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 HTRA4P83105 476 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 RPL6Q02878 288 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 SYCP1Q15431 976 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 RIOX2Q8IUF8 465 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 LRRC45Q96CN5 670 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MRGPRX3Q96LB0 322 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CNTNAP3BQ96NU0 1288 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SPXQ9BT56 116 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 LGR4Q9BXB1 951 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CNTNAP3Q9BZ76 1288 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TRIM7Q9C029 511 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 PHACTR1Q9C0D0 580 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SENP6Q9GZR1 1112 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 ADAM19Q9H013 955 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MMRN2Q9H8L6 949 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ZBTB40Q9NUA8 1239 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 STK39Q9UEW8 545 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 IL19Q9UHD0 177 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MTUS1Q9ULD2 1270 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MAGED2Q9UNF1 606 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 SIK3Q9Y2K2 1263 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ASXL2Q76L83 1435 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 DIP2BQ9P265 1576 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 RUSC2Q8N2Y8 1516 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TRIM38O00635 465 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 PLGP00747 810 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 LRG1P02750 347 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TUBB4AP04350 444 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 RB1P06400 928 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CSH1P0DML2 217 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CSH2P0DML3 217 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ARF4P18085 180 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 AGXTP21549 392 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ADSSP30520 456 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ZNF445P59923 1031 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 COASYQ13057 564 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TARBP2Q15633 366 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 TYSND1Q2T9J0 566 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 C2orf76Q3KRA6 126 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 STXBP5Q5T5C0 1151 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 BROXQ5VW32 411 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ZCCHC12Q6PEW1 402 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 OLFML1Q6UWY5 402 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ARHGAP27Q6ZUM4 889 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 DGLUCYQ7Z3D6 616 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SZRD1Q7Z422 152 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CCNJLQ8IV13 435 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SULF2Q8IWU5 870 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 THNSL1Q8IYQ7 743 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 ARRDC4Q8NCT1 418 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 FIBINQ8TAL6 211 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 XAGE2Q96GT9 111 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CCDC43Q96MW1 224 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 TBCDQ9BTW9 1192 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 TLR7Q9NYK1 1049 aaKnown RBP4.28□□□□□ -1.72
UBR3-206ENST00000444475 CHMP5Q9NZZ3 219 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 APEX2Q9UBZ4 518 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 CCL27Q9Y4X3 112 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 SLC4A4Q9Y6R1 1079 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 FANCD2Q9BXW9 1451 aa4.28□□□□□ -1.72
UBR3-206ENST00000444475 GOLGA6L10A0A0M3HER8 536 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 FAM234BA2RU67 622 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 BLACEA4D250 179 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 FAM205CA6NFA0 338 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 AGRPO00253 132 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 AP3D1O14617 1153 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 DDHD2O94830 711 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 KCNH1O95259 989 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 PNLIPRP1P54315 467 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 CREMQ03060 361 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 MORF4L2Q15014 288 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 OVOS1Q6IE37 1185 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 DTHD1Q6ZMT9 781 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 ZNF574Q6ZN55 896 aaPredicted RBP4.27□□□□□ -1.73
UBR3-206ENST00000444475 RGS9BPQ6ZS82 235 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 MAMDC2Q7Z304 686 aaPredicted RBP4.27□□□□□ -1.73
UBR3-206ENST00000444475 TRIM59Q8IWR1 403 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 SSH1Q8WYL5 1049 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
UBR3-206ENST00000444475 LRRCC1Q9C099 1032 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms