RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LRRC57Q8N9N7 239 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 EIF1ADQ8N9N8 165 aaKnown RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 FBXL13Q8NEE6 735 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 TRPV1Q8NER1 839 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SPATA4Q8NEY3 305 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SLC30A5Q8TAD4 765 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 DEPTORQ8TB45 409 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MORC4Q8TE76 937 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 PARD3BQ8TEW8 1205 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 TCP11Q8WWU5 503 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 POMGNT1Q8WZA1 660 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SHC3Q92529 594 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 NAP1L3Q99457 506 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 ARID3AQ99856 593 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 FUT8Q9BYC5 575 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 GPR88Q9GZN0 384 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 TMEM117Q9H0C3 514 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 ASCC2Q9H1I8 757 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 PORCNQ9H237 461 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MROH8Q9H579 483 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 BCAS3Q9H6U6 928 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 TXNRD2Q9NNW7 524 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 C1orf112Q9NSG2 853 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 STIM2Q9P246 746 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 SUCLA2Q9P2R7 463 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MORF4L1Q9UBU8 362 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 AJAP1Q9UKB5 411 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-209ENST00000440653 STYXL1Q9Y6J8 313 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 BAHCC1Q9P281 2608 aa9.84□□□□□ -0.83
HDAC6-209ENST00000440653 MIF4GDA9UHW6 222 aaKnown RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PGRMC1O00264 195 aaKnown RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 KIAA0355O15063 1070 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 CLTBP09497 229 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 GZMAP12544 262 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 TNFAIP3P21580 790 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 NOP2P46087 812 aaKnown RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 GCLMP48507 274 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 EFNA5P52803 228 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 AP3M2P53677 418 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 CBX1P83916 185 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 C2orf54Q08AI8 447 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 KCTD2Q14681 263 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PSMD6Q15008 389 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 Q3C1V9 767 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 MTERF2Q49AM1 385 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 HSP90B2PQ58FF3 399 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 TMEM240Q5SV17 173 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 MORN1Q5T089 497 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 C1orf220Q5T0J3 134 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 EMBQ6PCB8 327 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 NCAPG2Q86XI2 1143 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 ZNF677Q86XU0 584 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 GOLGA6L1Q8N7Z2 621 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 TPCN2Q8NHX9 752 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 LNX1Q8TBB1 728 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 ACTRT1Q8TDG2 376 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 SOCS4Q8WXH5 440 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 BSNDQ8WZ55 320 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 TRIM11Q96F44 468 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PACSIN1Q9BY11 444 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 UBXN6Q9BZV1 441 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 C2orf40Q9H1Z8 148 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 PCIF1Q9H4Z3 704 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 AZI2Q9H6S1 392 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 POLD4Q9HCU8 107 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 NRBP2Q9NSY0 501 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 BTBD7Q9P203 1132 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 SALL4Q9UJQ4 1053 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 MTCH2Q9Y6C9 303 aa9.83□□□□□ -0.84
HDAC6-209ENST00000440653 ZFHX2Q9C0A1 2572 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-209ENST00000440653 ADGRA3Q8IWK6 1321 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 TMEM150BA6NC51 233 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 ZNF233A6NK53 670 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 LRRIQ3A6PVS8 624 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 PDE2AO00408 941 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 GFRA3O60609 400 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 SRGAP2O75044 1071 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 LRRN2O75325 713 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 LGR5O75473 907 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 MTA2O94776 668 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 SEC31AO94979 1220 aaKnown RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 FTCDO95954 541 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 ADSSP30520 456 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 RGS2P41220 211 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 CLDN10P78369 228 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 CCNA1P78396 465 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 PAK2Q13177 524 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 CDCA2Q69YH5 1023 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-209ENST00000440653 PHLDB3Q6NSJ2 640 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 GJB7Q6PEY0 223 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 ZPBP2Q6X784 338 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 CYFIP1Q7L576 1253 aa9.82□□□□□ -0.84
HDAC6-209ENST00000440653 PEX26Q7Z412 305 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms