RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 HVCN1Q96D96 273 aa26.21■■□□□ 1.79
CPNE1-217ENST00000439669 POP1Q99575 1024 aaKnown RBP26.21■■□□□ 1.79
CPNE1-217ENST00000439669 MSTO1Q9BUK6 570 aa26.21■■□□□ 1.79
CPNE1-217ENST00000439669 S1PR5Q9H228 398 aa26.21■■□□□ 1.79
CPNE1-217ENST00000439669 OGTO15294 1046 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 POLR2DO15514 142 aaKnown RBP26.2■■□□□ 1.78
CPNE1-217ENST00000439669 MEFVO15553 781 aaPredicted RBP26.2■■□□□ 1.78
CPNE1-217ENST00000439669 GCNT3O95395 438 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 TNFSF9P41273 254 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 CLCN4P51793 760 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 KRT85P78386 507 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 UPP1Q16831 310 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 DCLRE1AQ6PJP8 1040 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 CCDC65Q8IXS2 484 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 CHAMP1Q96JM3 812 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 RXFP1Q9HBX9 757 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.2■■□□□ 1.78
CPNE1-217ENST00000439669 KBTBD4Q9NVX7 518 aa26.2■■□□□ 1.78
CPNE1-217ENST00000439669 NCOR1O75376 2440 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 A0A0B4J269 797 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 TMEM189-UBE2V1I3L0A0 370 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 AMPD3Q01432 767 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 CREMQ03060 361 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 PPP2R3AQ06190 1150 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 RTP2Q5QGT7 225 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 ZBTB41Q5SVQ8 909 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 RARS2Q5T160 578 aaKnown RBP26.19■■□□□ 1.78
CPNE1-217ENST00000439669 RESP18Q5W5W9 173 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 CES5AQ6NT32 575 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 C12orf76Q8N812 135 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-217ENST00000439669 SUSD6Q92537 303 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 C18orf25Q96B23 403 aaPredicted RBP26.19■■□□□ 1.78
CPNE1-217ENST00000439669 DDX27Q96GQ7 796 aaKnown RBP26.19■■□□□ 1.78
CPNE1-217ENST00000439669 SPATA32Q96LK8 384 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 FBXL18Q96ME1 805 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 TTPALQ9BTX7 342 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 RPF1Q9H9Y2 349 aaKnown RBP26.19■■□□□ 1.78
CPNE1-217ENST00000439669 PLEKHA5Q9HAU0 1116 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 OLFML3Q9NRN5 406 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 EXOC7Q9UPT5 735 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 ATP6V1DQ9Y5K8 247 aa26.19■■□□□ 1.78
CPNE1-217ENST00000439669 FRMD3A2A2Y4 597 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 TISP43B9A030 160 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 ANKRD63C9JTQ0 380 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 PODXLO00592 558 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 PPP1R37O75864 691 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 ASIC1P78348 528 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 CBX2Q14781 532 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-217ENST00000439669 SLFN12LQ6IEE8 588 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 PRSS55Q6UWB4 352 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-217ENST00000439669 GLYCTKQ8IVS8 523 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 GPR65Q8IYL9 337 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 TRIM9Q9C026 710 aa26.18■■□□□ 1.78
CPNE1-217ENST00000439669 GLUD1P00367 558 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 MYBP10242 640 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 RPL17P18621 184 aaKnown RBP26.17■■□□□ 1.78
CPNE1-217ENST00000439669 ITIH3Q06033 890 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 SPAG1Q07617 926 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 L1TD1Q5T7N2 865 aaKnown RBP26.17■■□□□ 1.78
CPNE1-217ENST00000439669 ADALQ6DHV7 355 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 C3orf58Q8NDZ4 430 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 LEO1Q8WVC0 666 aaPredicted RBP26.17■■□□□ 1.78
CPNE1-217ENST00000439669 FAM212AQ96EL1 285 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 KIF12Q96FN5 646 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 ACCSQ96QU6 501 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 IKZF4Q9H2S9 585 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 ADAM7Q9H2U9 754 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 SFXN1Q9H9B4 322 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 MAGEF1Q9HAY2 307 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 CDH22Q9UJ99 828 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 PCDHB13Q9Y5F0 798 aa26.17■■□□□ 1.78
CPNE1-217ENST00000439669 TTC26A0AVF1 554 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 FAM189A1O60320 539 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 IGFBP6P24592 240 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-217ENST00000439669 CASP5P51878 434 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 ALCAMQ13740 583 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 ENOX2Q16206 610 aaKnown RBP26.16■■□□□ 1.78
CPNE1-217ENST00000439669 KANK3Q6NY19 840 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-217ENST00000439669 PIK3R5Q8WYR1 880 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 PYM1Q9BRP8 204 aaKnown RBP26.16■■□□□ 1.78
CPNE1-217ENST00000439669 PHF7Q9BWX1 381 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-217ENST00000439669 STRA6Q9BX79 667 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 MAN1C1Q9NR34 630 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 TUBGCP4Q9UGJ1 667 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 KCNH3Q9ULD8 1083 aa26.16■■□□□ 1.78
CPNE1-217ENST00000439669 C19orf67A6NJJ6 358 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 LACTBL1A8MY62 500 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 I3L4J1 428 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 TRAPPC3O43617 180 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 WEE2P0C1S8 567 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 RPL9P32969 192 aaKnown RBP26.15■■□□□ 1.78
CPNE1-217ENST00000439669 BRCC3P46736 316 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 KCNA1Q09470 495 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 PSMD5Q16401 504 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 ELMSAN1Q6PJG2 1045 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 CD300LGQ6UXG3 332 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 PALB2Q86YC2 1186 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 SYCP3Q8IZU3 236 aa26.15■■□□□ 1.78
CPNE1-217ENST00000439669 POMGNT1Q8WZA1 660 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms