RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 SLC1A5Q15758 541 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 PKN2Q16513 984 aaKnown RBP19.23■□□□□ 0.67
KCNC4-204ENST00000438661 ZNF568Q3ZCX4 644 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 PLEKHG4Q58EX7 1191 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 CFAP157Q5JU67 520 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 C16orf86Q6ZW13 317 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 GATA6Q92908 595 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 PTPRN2Q92932 1015 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 TUBGCP5Q96RT8 1024 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 GPR88Q9GZN0 384 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 TRABDQ9H4I3 376 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 UBE2TQ9NPD8 197 aaPredicted RBP19.23■□□□□ 0.67
KCNC4-204ENST00000438661 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 SPATA31D3P0C874 917 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 ITIH2P19823 946 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 SLC16A2P36021 539 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 SIX1Q15475 284 aaPredicted RBP19.23■□□□□ 0.67
KCNC4-204ENST00000438661 USP17L6PQ6QN14 398 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 SPATA31D4Q6ZUB0 917 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 ZNF287Q9HBT7 754 aa19.23■□□□□ 0.67
KCNC4-204ENST00000438661 TYW1Q9NV66 732 aaKnown RBP19.23■□□□□ 0.67
KCNC4-204ENST00000438661 LYNP07948 512 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 FGFR1P11362 822 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 CATSPER3Q86XQ3 398 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 PRR11Q96HE9 360 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 ZNF184Q99676 751 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 INTS2Q9H0H0 1204 aaKnown RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 TMEM165Q9HC07 324 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 WHRNQ9P202 907 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 NARFQ9UHQ1 456 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 NMT1P30419 496 aaKnown RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 CETN2P41208 172 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 OCRLQ01968 901 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 DEUP1Q05D60 604 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 ORC2Q13416 577 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 EAPPQ56P03 285 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 PHLDB3Q6NSJ2 640 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 RFWD2Q8NHY2 731 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 TTC1Q99614 292 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 BHMT2Q9H2M3 363 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 FBXO6Q9NRD1 293 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-204ENST00000438661 DNM3Q9UQ16 869 aa19.22■□□□□ 0.67
KCNC4-204ENST00000438661 C2orf71A6NGG8 1288 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 GSC2O15499 205 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 CCDC22O60826 627 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 LDHCP07864 332 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 RTP1P59025 263 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 LRRC36Q1X8D7 754 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 SMC6Q96SB8 1091 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 BTBD10Q9BSF8 475 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 TIPINQ9BVW5 301 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 VCX3BQ9H321 246 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 VCX3AQ9NNX9 186 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 HEY2Q9UBP5 337 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 TBCAO75347 108 aaKnown RBP19.21■□□□□ 0.67
KCNC4-204ENST00000438661 RRM1P23921 792 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 WDR72Q3MJ13 1102 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 AMIGO3Q86WK7 504 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 ATL2Q8NHH9 583 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 NUP85Q9BW27 656 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 RIOX1Q9H6W3 641 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 KRT82Q9NSB4 513 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 PDP2Q9P2J9 529 aa19.21■□□□□ 0.67
KCNC4-204ENST00000438661 ZBED4O75132 1171 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 POLD1P28340 1107 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 SEPT7Q16181 437 aaKnown RBP19.2■□□□□ 0.66
KCNC4-204ENST00000438661 DAB2IPQ5VWQ8 1189 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 FYB2Q5VWT5 728 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 IZUMO2Q6UXV1 221 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 SLC5A5Q92911 643 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 DNAAF2Q9NVR5 837 aaKnown RBP19.2■□□□□ 0.66
KCNC4-204ENST00000438661 APEX2Q9UBZ4 518 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 COL16A1Q07092 1604 aaPredicted RBP19.2■□□□□ 0.66
KCNC4-204ENST00000438661 A0A1W2PPM1 405 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 GGPS1O95749 300 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 AMPD1P23109 780 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 PSMC2P35998 433 aaKnown RBP19.2■□□□□ 0.66
KCNC4-204ENST00000438661 NT5C2P49902 561 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 C11orf63Q6NUN7 778 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 RHBDF2Q6PJF5 856 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 LVRNQ6Q4G3 990 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 ZNF564Q8TBZ8 553 aaPredicted RBP19.2■□□□□ 0.66
KCNC4-204ENST00000438661 SPATA16Q9BXB7 569 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 GOLGA8RI6L899 631 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 GNPATO15228 680 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 ECE2O60344 883 aa19.2■□□□□ 0.66
KCNC4-204ENST00000438661 OPHN1O60890 802 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms