RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GBX1Q14549 363 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 ICAM4Q14773 271 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 PRKD1Q15139 912 aaPredicted RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 VPS72Q15906 364 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 NAIF1Q69YI7 327 aaPredicted RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 Q6ZSN1 163 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 HEATR3Q7Z4Q2 680 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 DAAM2Q86T65 1068 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 DGKHQ86XP1 1220 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 FBXO18Q8NFZ0 1043 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 OR52N2Q8NGI0 321 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 TTC17Q96AE7 1141 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 MNTQ99583 582 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 CGRRF1Q99675 332 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 VRK1Q99986 396 aaPredicted RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 LSM14BQ9BX40 385 aaKnown RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 REXO4Q9GZR2 422 aaKnown RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 TMEM60Q9H2L4 133 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 CD248Q9HCU0 757 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 PNPOQ9NVS9 261 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 SMPD4Q9NXE4 827 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 FEZ2Q9UHY8 353 aaPredicted RBP4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 PCDHA3Q9Y5H8 950 aa4.81□□□□□ -1.64
LSM1P1-201ENST00000438629 A0A088AWK7 358 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 H3BUI4 141 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 PRC1O43663 620 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 TUSC2O75896 110 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ALDH2P05091 517 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 FPR1P21462 350 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 HTR1BP28222 390 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 MAN2A2P49641 1150 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ZNF280AP59817 542 aaPredicted RBP4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 SNAPC2Q13487 334 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 FGL2Q14314 439 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 UBXN2BQ14CS0 331 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ANO6Q4KMQ2 910 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 FLYWCH1Q4VC44 716 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 SPTY2D1Q68D10 685 aaPredicted RBP4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ANKS6Q68DC2 871 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 SLC4A10Q6U841 1118 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 XYLT1Q86Y38 959 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ZNF808Q8N4W9 903 aaPredicted RBP4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 SLC35B2Q8TB61 432 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 KLHDC4Q8TBB5 520 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 DCLRE1CQ96SD1 692 aaKnown RBP4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 ADOQ96SZ5 270 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 GPR87Q9BY21 358 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 CNNM1Q9NRU3 951 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 JAG2Q9Y219 1238 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 RUVBL1Q9Y265 456 aaKnown RBP4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 TESMINQ9Y4I5 508 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 NR2E3Q9Y5X4 410 aa4.8□□□□□ -1.64
LSM1P1-201ENST00000438629 XDHP47989 1333 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 FRMPD2Q68DX3 1309 aaPredicted RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 DIRC3C9JPN6 131 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 FAM227AF5H4B4 570 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 KIAA0391O15091 583 aaKnown RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 B3GALT2O43825 422 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 RECQL4O94761 1208 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 ANXA1P04083 346 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 HRGP04196 525 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 KRT18P05783 430 aaKnown RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 TYRP14679 529 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 HK1P19367 917 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 MAGEA10P43363 369 aaPredicted RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 RAP2BP61225 183 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 CRHR2Q13324 411 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 PPP4R4Q6NUP7 873 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 NOL8Q76FK4 1167 aaKnown RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 CHST15Q7LFX5 561 aaPredicted RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 MB21D1Q8N884 522 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 OR10H5Q8NGA6 315 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 DVL3Q92997 716 aaPredicted RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 RAB24Q969Q5 203 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 NDC1Q9BTX1 674 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 PACSIN1Q9BY11 444 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 KLC2Q9H0B6 622 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 SARS2Q9NP81 518 aaKnown RBP4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 RLIMQ9NVW2 624 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 GABBR1Q9UBS5 961 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 ABCF2Q9UG63 623 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 SLC23A1Q9UHI7 598 aa4.79□□□□□ -1.64
LSM1P1-201ENST00000438629 PNPLA7Q6ZV29 1317 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 TCRBV7S2A1N4TA0A589 114 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 F2RL2O00254 374 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 MUSKO15146 869 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 GRM6O15303 877 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 SLC43A1O75387 559 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 CD1AP06126 327 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 GNAI3P08754 354 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 AGFG1P52594 562 aaKnown RBP4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 RABGGTBP53611 331 aa4.78□□□□□ -1.64
LSM1P1-201ENST00000438629 CACNB3P54284 484 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms