RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SCUBE1Q8IWY4 988 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 C7orf31Q8N865 590 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 MIGA1Q8NAN2 632 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCYOX1LQ8NBM8 494 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZBTB34Q8NCN2 500 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 BVESQ8NE79 360 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 GSTCDQ8NEC7 633 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 SSH3Q8TE77 659 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF503Q96F45 646 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 SCLYQ96I15 445 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 HIC2Q96JB3 615 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 IPO9Q96P70 1041 aaKnown RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 C22orf23Q9BZE7 217 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 IKZF4Q9H2S9 585 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 RANBP17Q9H2T7 1088 aaKnown RBP4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 BRD9Q9H8M2 597 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 SLC52A2Q9HAB3 445 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 UBN1Q9NPG3 1134 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ITM2CQ9NQX7 267 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 COMMD8Q9NX08 183 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 GGA3Q9NZ52 723 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 ADAM29Q9UKF5 820 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 GPR34Q9UPC5 381 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 POLHQ9Y253 713 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 IKBKGQ9Y6K9 419 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 X6R8D5 127 aa4.13□□□□□ -1.75
HMGB1P12-201ENST00000438594 A0A087WV62 115 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 FSD2A1L4K1 749 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF891A8MT65 544 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 TISP43B9A030 160 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 B9A039 149 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 EIF3FO00303 357 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 RTCAO00442 366 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 MEFVO15553 781 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 PPFIA2O75334 1257 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ABCB4P21439 1286 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 IGFALSP35858 605 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 SSR1P43307 286 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 GLRBP48167 497 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 PAPOLAP51003 745 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ATXN1P54253 815 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 NANOS3P60323 173 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 SUMO1P63165 101 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 IRX3P78415 501 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 IFIT5Q13325 482 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 PSMD6Q15008 389 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZKSCAN8Q15776 578 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 MEA1Q16626 185 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CFAP100Q494V2 611 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC38Q502W7 563 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CCDC149Q6ZUS6 474 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 OVCH2Q7RTZ1 564 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ZNF575Q86XF7 245 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMTC1Q8IUR5 882 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 DNAJC10Q8IXB1 793 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 COLGALT2Q8IYK4 626 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CEP57L1Q8IYX8 460 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 NAT8LQ8N9F0 302 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 LILRB1Q8NHL6 650 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 KCTD13Q8WZ19 329 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ANP32BQ92688 251 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 KIAA1191Q96A73 305 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 RADILQ96JH8 1075 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 NT5C1BQ96P26 610 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ACO2Q99798 780 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 AARSD1Q9BTE6 412 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 KATNAL1Q9BW62 490 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 APOL5Q9BWW9 433 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 SEC61A2Q9H9S3 476 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CYP26B1Q9NR63 512 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 PLSCR4Q9NRQ2 329 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 ARGLU1Q9NWB6 273 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CLDND1Q9NY35 253 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 MYOTQ9UBF9 498 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 NDOR1Q9UHB4 597 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 HERC5Q9UII4 1024 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMEFF2Q9UIK5 374 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 FBXL7Q9UJT9 491 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 WASF3Q9UPY6 502 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 RRP15Q9Y3B9 282 aaKnown RBP4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 PCDHA2Q9Y5H9 948 aa4.12□□□□□ -1.75
HMGB1P12-201ENST00000438594 A0A087X1B8 175 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 TMEM110-MUSTN1A8MSY1 372 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 GOLGA6L22H0YM25 854 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 FOXN3O00409 490 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 PES1O00541 588 aaKnown RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 SNRPB2P08579 225 aaKnown RBP4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 DHRS4L1P0CG22 281 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ATP1A3P13637 1013 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 ATP6V1B1P15313 513 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 COMTP21964 271 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 KRT9P35527 623 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 KCNJ6P48051 423 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 PRIM2P49643 509 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 SCNN1BP51168 640 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 DCAF7P61962 342 aa4.11□□□□□ -1.75
HMGB1P12-201ENST00000438594 UBXN2AP68543 259 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms