RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ORC2Q13416 577 aaPredicted RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 PRPF4BQ13523 1007 aaKnown RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 HSP90AA2PQ14568 343 aaPredicted RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 MAPK6Q16659 721 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 ME3Q16798 604 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 PDXDC1Q6P996 788 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 CDR2LQ86X02 465 aaPredicted RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 PALB2Q86YC2 1186 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 GLYCTKQ8IVS8 523 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 SIX5Q8N196 739 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 FAM184AQ8NB25 1140 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 EHBP1Q8NDI1 1231 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 NSUN7Q8NE18 718 aaKnown RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 HDAC7Q8WUI4 952 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 C8orf76Q96K31 380 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 IFT74Q96LB3 600 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 RAB34Q9BZG1 259 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 SMOC2Q9H3U7 446 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 WDR6Q9NNW5 1121 aaKnown RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 GPRC5CQ9NQ84 441 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 MARCH5Q9NX47 278 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 ZDHHC7Q9NXF8 308 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 PPP4R2Q9NY27 417 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 KLK14Q9P0G3 267 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
VPS50-204ENST00000438395 NOL7Q9UMY1 257 aaKnown RBP8.57□□□□□ -1.04
VPS50-204ENST00000438395 A0A1B0GUA9 196 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 XYLBO75191 536 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 RFPL2O75678 378 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 LARGE1O95461 756 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 PRKCBP05771 671 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 FDPSP14324 419 aaKnown RBP8.56□□□□□ -1.04
VPS50-204ENST00000438395 CCT6AP40227 531 aaKnown RBP8.56□□□□□ -1.04
VPS50-204ENST00000438395 EFNA5P52803 228 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 TUSC3Q13454 348 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 DCAF4L1Q3SXM0 396 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 GET4Q7L5D6 327 aaPredicted RBP8.56□□□□□ -1.04
VPS50-204ENST00000438395 CEP57Q86XR8 500 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 TMEM105Q8N8V8 129 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 HASPINQ8TF76 798 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 NXPE3Q969Y0 559 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 B3GALT6Q96L58 329 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 RTP3Q9BQQ7 232 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 KCNK12Q9HB15 430 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 RXFP1Q9HBX9 757 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS50-204ENST00000438395 POLIQ9UNA4 740 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 DUSP12Q9UNI6 340 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 KIF3AQ9Y496 699 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 FAM186AA6NE01 2351 aa8.56□□□□□ -1.04
VPS50-204ENST00000438395 SPTBN4Q9H254 2564 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 A0A087WWV3 80 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 F8W810 466 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 SIAH2O43255 324 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 TGM5O43548 720 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 LILRB3O75022 631 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 RECQL4O94761 1208 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 C1RP00736 705 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 THP07101 528 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 NAMPTP43490 491 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 RBM25P49756 843 aaKnown RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 YARSP54577 528 aaKnown RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 PSMD5Q16401 504 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 CDCA2Q69YH5 1023 aaPredicted RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 DESI1Q6ICB0 168 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 TAS1R1Q7RTX1 841 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 CATSPER3Q86XQ3 398 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 CCDC83Q8IWF9 413 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 RABGGTAQ92696 567 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 KIFAP3Q92845 792 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 NKD2Q969F2 451 aaPredicted RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 TTPALQ9BTX7 342 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 POLR3CQ9BUI4 534 aaPredicted RBP8.55□□□□□ -1.04
VPS50-204ENST00000438395 RHOBTB2Q9BYZ6 727 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 GPR62Q9BZJ7 368 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 FNIP2Q9P278 1114 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 EPS15L1Q9UBC2 864 aa8.55□□□□□ -1.04
VPS50-204ENST00000438395 ACKR2O00590 384 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 TRAPPC3O43617 180 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 MED24O75448 989 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 HNRNPA1P09651 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS50-204ENST00000438395 SPATA31C1P0DKV0 1188 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 SRFP11831 508 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 RPL17P18621 184 aaKnown RBP8.54□□□□□ -1.04
VPS50-204ENST00000438395 CYP11B2P19099 503 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 AOC1P19801 751 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 FSHRP23945 695 aa8.54□□□□□ -1.04
VPS50-204ENST00000438395 RPA1P27694 616 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms