RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 PBX2P40425 430 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 GUCY2FP51841 1108 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 DLG4P78352 724 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 GRIK3Q13003 919 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 PSMD6Q15008 389 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 INTS8Q75QN2 995 aaKnown RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 LUZP1Q86V48 1076 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 ZNF280BQ86YH2 543 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 EFCAB13Q8IY85 973 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 LRRC43Q8N309 656 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 FIBCD1Q8N539 461 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 PLEKHO2Q8TD55 490 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 TMEM174Q8WUU8 243 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 RABGGTAQ92696 567 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 C18orf25Q96B23 403 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 ZNF689Q96CS4 500 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 THAP9Q9H5L6 903 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 GOLGA2P5Q9HBQ8 144 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 FANCLQ9NW38 375 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 CACNG4Q9UBN1 327 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 TDRD15B5MCY1 1934 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 CASTOR2A6NHX0 329 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 LRRIQ3A6PVS8 624 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 MAPK13O15264 365 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 ZC3H11AO75152 810 aaKnown RBP eCLIP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 DDHD2O94830 711 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 CLSTN1O94985 981 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 GNA14O95837 355 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 TMEM191BP0C7N4 346 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 KCNE1P15382 129 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 MTIF2P46199 727 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 POU5F1Q01860 360 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 BFSP1Q12934 665 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 XKR4Q5GH76 650 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 DHX40Q8IX18 779 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 PARD3BQ8TEW8 1205 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 CGRRF1Q99675 332 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 BPIFA3Q9BQP9 254 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 PRO3102Q9H379 93 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 NRDE2Q9H7Z3 1164 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 METTL14Q9HCE5 456 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 UBQLN1Q9UMX0 589 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 MRPL42Q9Y6G3 142 aaKnown RBP16.62■□□□□ 0.25
CNOT9-205ENST00000433439 ANK1P16157 1881 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
CNOT9-205ENST00000433439 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 PBX3P40426 434 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 SOX4Q06945 474 aaPredicted RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 BIRC3Q13489 604 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 NCAPHQ15003 741 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 FRMD5Q7Z6J6 570 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 USP37Q86T82 979 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 BEST2Q8NFU1 509 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 OR5B17Q8NGF7 314 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 TMC2Q8TDI7 906 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 ANKRD36BP1Q96IX9 119 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 PPP1R10Q96QC0 940 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 PBX4Q9BYU1 374 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 MTMR12Q9C0I1 747 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 RC3H2Q9HBD1 1191 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 SLC38A7Q9NVC3 462 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 YBX2Q9Y2T7 364 aaKnown RBP16.61■□□□□ 0.25
CNOT9-205ENST00000433439 PTPRJQ12913 1337 aa16.61■□□□□ 0.25
CNOT9-205ENST00000433439 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
CNOT9-205ENST00000433439 IKBKBO14920 756 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 INPPL1O15357 1258 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 B4GALT3O60512 393 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 PHACTR2O75167 634 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 CAVIN2O95810 425 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 TNNC2P02585 160 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 CA3P07451 260 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 KRT19P08727 400 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 OR1G1P47890 313 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 TUSC3Q13454 348 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 IQCB1Q15051 598 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 IRF2BP1Q8IU81 584 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 BORCS6Q96GS4 357 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 DPP3Q9NY33 737 aa16.6■□□□□ 0.25
CNOT9-205ENST00000433439 MTUS1Q9ULD2 1270 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms