RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 GOLGA5Q8TBA6 731 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 NOC3LQ8WTT2 800 aaKnown RBP20.21■□□□□ 0.83
DDR1-236ENST00000431373 RABGGTAQ92696 567 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 KIF12Q96FN5 646 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 PAAF1Q9BRP4 392 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 HSPBP1Q9NZL4 362 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 STK39Q9UEW8 545 aa20.21■□□□□ 0.83
DDR1-236ENST00000431373 GOLGA8IPA6NC78 632 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 GOLGA8JA6NMD2 632 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 F8W810 466 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 CLIC2O15247 247 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 IL18RAPO95256 599 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 ERVFC1P60507 584 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 SOX4Q06945 474 aaPredicted RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 SPAG1Q07617 926 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 ZNF658Q5TYW1 1059 aaPredicted RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 PDE12Q6L8Q7 609 aaKnown RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 BRSK2Q8IWQ3 736 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 C18orf25Q96B23 403 aaPredicted RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 GTPBP4Q9BZE4 634 aaKnown RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 KCTD10Q9H3F6 313 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 NSUN3Q9H649 340 aaKnown RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 ASB7Q9H672 318 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 GOLGA2P5Q9HBQ8 144 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 ADAM28Q9UKQ2 775 aa20.2■□□□□ 0.82
DDR1-236ENST00000431373 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.2■□□□□ 0.82
DDR1-236ENST00000431373 XPOTO43592 962 aaKnown RBP20.19■□□□□ 0.82
DDR1-236ENST00000431373 IRS1P35568 1242 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 CYP2J2P51589 502 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 CCDC85BQ15834 202 aaPredicted RBP20.19■□□□□ 0.82
DDR1-236ENST00000431373 ZBTB6Q15916 424 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 JADE1Q6IE81 842 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 VPS52Q8N1B4 723 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 PPM1EQ8WY54 764 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 DDX27Q96GQ7 796 aaKnown RBP20.19■□□□□ 0.82
DDR1-236ENST00000431373 TCF25Q9BQ70 676 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 KIAA1586Q9HCI6 787 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 ENTPD7Q9NQZ7 604 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 RBAKQ9NYW8 714 aaPredicted RBP20.19■□□□□ 0.82
DDR1-236ENST00000431373 UBQLN1Q9UMX0 589 aaKnown RBP20.19■□□□□ 0.82
DDR1-236ENST00000431373 MAPK8IP1Q9UQF2 711 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 DERAQ9Y315 318 aa20.19■□□□□ 0.82
DDR1-236ENST00000431373 ZNF233A6NK53 670 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 TMEM189-UBE2V1I3L0A0 370 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 PDXKO00764 312 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 FSCN2O14926 492 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 TADA2AO75478 443 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 KIF4AO95239 1232 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 CYP3A5P20815 502 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 CLCNKBP51801 687 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 BMS1Q14692 1282 aaKnown RBP20.18■□□□□ 0.82
DDR1-236ENST00000431373 TMEM132DQ14C87 1099 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 UPP1Q16831 310 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 SMYD4Q8IYR2 804 aaPredicted RBP20.18■□□□□ 0.82
DDR1-236ENST00000431373 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 VN1R3Q9BXE9 311 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 ZBP1Q9H171 429 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 NGRNQ9NPE2 291 aaKnown RBP20.18■□□□□ 0.82
DDR1-236ENST00000431373 TUBGCP4Q9UGJ1 667 aa20.18■□□□□ 0.82
DDR1-236ENST00000431373 NFICP08651 508 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 RPL9P32969 192 aaKnown RBP20.17■□□□□ 0.82
DDR1-236ENST00000431373 CAMK4Q16566 473 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 COBLL1Q53SF7 1204 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 TCEAL5Q5H9L2 206 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 PLPP4Q5VZY2 271 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 FUT10Q6P4F1 479 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 DCLRE1AQ6PJP8 1040 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 BEST2Q8NFU1 509 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 HASPINQ8TF76 798 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 PPP2R3CQ969Q6 453 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 FBXL18Q96ME1 805 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 HERC2P3Q9BVR0 1158 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 C2CD2Q9Y426 696 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 PCDHGC5Q9Y5F6 944 aa20.17■□□□□ 0.82
DDR1-236ENST00000431373 VWA8A3KMH1 1905 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 PODXLO00592 558 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 CALUO43852 315 aaPredicted RBP20.16■□□□□ 0.82
DDR1-236ENST00000431373 B3GAT3O94766 335 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 EFEMP2O95967 443 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 SOD2P04179 222 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 CTSAP10619 480 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 SMC1AQ14683 1233 aaKnown RBP20.16■□□□□ 0.82
DDR1-236ENST00000431373 SPATA1Q5VX52 437 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 NT5DC4Q86YG4 428 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 CBWD2Q8IUF1 395 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 SLC9A9Q8IVB4 645 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 RNF168Q8IYW5 571 aaPredicted RBP20.16■□□□□ 0.82
DDR1-236ENST00000431373 TMEM174Q8WUU8 243 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 CLSTN2Q9H4D0 955 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 TRAF3IP3Q9Y228 551 aa20.16■□□□□ 0.82
DDR1-236ENST00000431373 SF3B1O75533 1304 aaKnown RBP eCLIP20.16■□□□□ 0.826e-6■■■■■ 122.4
DDR1-236ENST00000431373 REV3LO60673 3130 aa20.15■□□□□ 0.82
DDR1-236ENST00000431373 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
DDR1-236ENST00000431373 EXOC3O60645 756 aa20.15■□□□□ 0.82
DDR1-236ENST00000431373 CXCL14O95715 111 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms