RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 A0A1W2PPC1 479 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 LACTBL1A8MY62 500 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 KCNJ18B7U540 433 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 TLL1O43897 1013 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 TNNC2P02585 160 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 THP07101 528 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 NFICP08651 508 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 TNNI1P19237 187 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 MTIF2P46199 727 aaKnown RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 RNASELQ05823 741 aaKnown RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 KCNJ12Q14500 433 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 NCAPHQ15003 741 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 IQCB1Q15051 598 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 CDKAL1Q5VV42 579 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 JADE1Q6IE81 842 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 ALKAL1Q6UXT8 129 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 CCDC127Q96BQ5 260 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 FAM193BQ96PV7 902 aaPredicted RBP11.92□□□□□ -0.5
CHD4-202ENST00000430771 PDE11AQ9HCR9 933 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 INSL6Q9Y581 213 aa11.92□□□□□ -0.5
CHD4-202ENST00000430771 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 LRRIQ3A6PVS8 624 aaPredicted RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 PTGESO14684 152 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 POMCP01189 267 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 CYP3A5P20815 502 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 GATMP50440 423 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 MXI1P50539 228 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 HTRA4P83105 476 aaPredicted RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 TUSC3Q13454 348 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 PAN2Q504Q3 1202 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 LUZP1Q86V48 1076 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 EFCAB13Q8IY85 973 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 PARD3BQ8TEW8 1205 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 ZNF689Q96CS4 500 aaPredicted RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 UROC1Q96N76 676 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 RAD9AQ99638 391 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 MTMR12Q9C0I1 747 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 FANCLQ9NW38 375 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 R3HCC1Q9Y3T6 440 aaKnown RBP11.91□□□□□ -0.5
CHD4-202ENST00000430771 RWDD3Q9Y3V2 267 aa11.91□□□□□ -0.5
CHD4-202ENST00000430771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHD4-202ENST00000430771 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 MEFVO15553 781 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 TRIM49P0CI25 452 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 TRIM49CP0CI26 452 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 ZNF18P17022 549 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 LAG3P18627 525 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 CDK11BP21127 795 aaKnown RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 GTF2H1P32780 548 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 WNT7BP56706 349 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 CLDN10P78369 228 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 BIRC3Q13489 604 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 RAB30Q15771 203 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 DUOXA2Q1HG44 320 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 HSP90AA4PQ58FG1 418 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 TCP11X2Q5H9J9 407 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 SPOUT1Q5T280 376 aaKnown RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 TMCO2Q7Z6W1 182 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 FIBCD1Q8N539 461 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 RNF214Q8ND24 703 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 SLC35C1Q96A29 364 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 BORCS6Q96GS4 357 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 ZNF560Q96MR9 790 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 ZMAT2Q96NC0 199 aaKnown RBP11.9□□□□□ -0.5
CHD4-202ENST00000430771 TMEM175Q9BSA9 504 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 TMEM8AQ9HCN3 771 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 ITGA11Q9UKX5 1188 aa11.9□□□□□ -0.5
CHD4-202ENST00000430771 ZC3H11AO75152 810 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHD4-202ENST00000430771 CLSTN1O94985 981 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 AFPP02771 609 aaKnown RBP11.89□□□□□ -0.51
CHD4-202ENST00000430771 LRPAP1P30533 357 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 MCCD1P59942 119 aaPredicted RBP11.89□□□□□ -0.51
CHD4-202ENST00000430771 MYL7Q01449 175 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 DSC1Q08554 894 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 CETN1Q12798 172 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 KRT39Q6A163 491 aa11.89□□□□□ -0.51
CHD4-202ENST00000430771 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms