RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 RD3Q7Z3Z2 195 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 SUPT3HB4E1H0 165 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 CALB1P05937 261 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 SOAT1P35610 550 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 SENP2Q9HC62 589 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 NCF1BA6NI72 391 aaPredicted RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 NCF1CA8MVU1 366 aaPredicted RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 NCF1P14598 390 aaPredicted RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 IER5Q5VY09 327 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 ABHD10Q9NUJ1 306 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 ALDH7A1P49419 539 aaKnown RBP13.89□□□□□ -0.19
SPG11-202ENST00000427534 ZRANB3Q5FWF4 1079 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 LRRC8EQ6NSJ5 796 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 ATG9AQ7Z3C6 839 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 GIPC2Q8TF65 315 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 PNKPQ96T60 521 aa13.89□□□□□ -0.19
SPG11-202ENST00000427534 F8W8V4 182 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 H0Y626 953 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 MZF1P28698 734 aaPredicted RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 ARHGEF7Q14155 803 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 IPMKQ8NFU5 416 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 FGFR1OP2Q9NVK5 253 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 BCORL1Q5H9F3 1711 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 LAMC1P11047 1609 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 MAFGO15525 162 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 TMCC1O94876 653 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 TCF7P36402 384 aaPredicted RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 FCGRTP55899 365 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 RAD51Q06609 339 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 ITPK1Q13572 414 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 DACH2Q96NX9 599 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 ADRA2BP18089 450 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 EMC2Q15006 297 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 PDCD2Q16342 344 aaPredicted RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 NSUN4Q96CB9 384 aaKnown RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 BPIFA3Q9BQP9 254 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 PITPNM3Q9BZ71 974 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 IP6K2Q9UHH9 426 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 EPAS1Q99814 870 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPG11-202ENST00000427534 CEP72Q9P209 647 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 SYCE1LA8MT33 242 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 MAP3K13O43283 966 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 KRT39Q6A163 491 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 MARCOQ9UEW3 520 aaPredicted RBP13.88□□□□□ -0.19
SPG11-202ENST00000427534 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 OVOS2A0A0J9YW53 1432 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 OVOS2Q6IE36 1432 aa13.88□□□□□ -0.19
SPG11-202ENST00000427534 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SCAMP3O14828 347 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 NCAM1P13591 858 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 AARS2Q5JTZ9 985 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 NUDT18Q6ZVK8 323 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 MIER2Q8N344 545 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 ARHGAP18Q8N392 663 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SEL1LQ9UBV2 794 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 PRR12Q9ULL5 1215 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 MIB1Q86YT6 1006 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 REEP2Q9BRK0 252 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 AURKCQ9UQB9 309 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SUPT3HO75486 399 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 DDNO94850 711 aaPredicted RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 APRTP07741 180 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 MMEP08473 750 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 PNMA6AP0CW24 399 aaPredicted RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 NPEPPSP55786 919 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 RABL6Q3YEC7 729 aaPredicted RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 TRIM48Q8IWZ4 208 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 PPP2R3CQ969Q6 453 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 ZDHHC9Q9Y397 364 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 PVALEFA0A1B0GWK0 134 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SOX10P56693 466 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 MMS22LQ6ZRQ5 1243 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 PKP3Q9Y446 797 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 GOLGA8QA0A0J9YX86 632 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 GOLGA8OA6NCC3 632 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 CASTOR2A6NHX0 329 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms