RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 CCDC43Q96MW1 224 aaKnown RBP9.59□□□□□ -0.87
VNN3-208ENST00000427187 PDZD7Q9H5P4 517 aa9.59□□□□□ -0.87
VNN3-208ENST00000427187 GOLGA2P5Q9HBQ8 144 aa9.59□□□□□ -0.87
VNN3-208ENST00000427187 GDAQ9Y2T3 454 aa9.59□□□□□ -0.87
VNN3-208ENST00000427187 RALGAPA1Q6GYQ0 2036 aa9.59□□□□□ -0.87
VNN3-208ENST00000427187 COL4A2P08572 1712 aa9.59□□□□□ -0.87
VNN3-208ENST00000427187 NCAM2O15394 837 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 TBC1D4O60343 1298 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 GDF9O60383 454 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 B3GAT3O94766 335 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 TDGF1P13385 188 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 FGFR3P22607 806 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 FCARP24071 287 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 PSMA5P28066 241 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 HOXC13P31276 330 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 CCR2P41597 374 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 MAGEA9P43362 315 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 BRCC3P46736 316 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 RPS9P46781 194 aaKnown RBP9.58□□□□□ -0.88
VNN3-208ENST00000427187 CLCNKBP51801 687 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 ARPP19P56211 112 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 POU5F1BQ06416 359 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 DMWDQ09019 674 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 NR5A1Q13285 461 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 EEF1DP3Q658K8 133 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.58□□□□□ -0.88
VNN3-208ENST00000427187 RUFY3Q7L099 469 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 ZNF687Q8N1G0 1237 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 C3orf58Q8NDZ4 430 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 BSNDQ8WZ55 320 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
VNN3-208ENST00000427187 CHAMP1Q96JM3 812 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 CORO1BQ9BR76 489 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 NFKBIZQ9BYH8 718 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 BRD9Q9H8M2 597 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 MTRRQ9UBK8 725 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 RAB23Q9ULC3 237 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 KCNH3Q9ULD8 1083 aa9.58□□□□□ -0.88
VNN3-208ENST00000427187 NCANO14594 1321 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 WNT7AO00755 349 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 GJA1P17302 382 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 SATB1Q01826 763 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 ROR1Q01973 937 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 SCRN1Q12765 414 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 ELAVL2Q12926 359 aaKnown RBP9.57□□□□□ -0.88
VNN3-208ENST00000427187 UVSSAQ2YD98 709 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 FAM78AQ5JUQ0 283 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 CD300LGQ6UXG3 332 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 SLFN12Q8IYM2 578 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 ELSPBP1Q96BH3 223 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 ZSWIM3Q96MP5 696 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 NELL2Q99435 816 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 HSD17B14Q9BPX1 270 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 KIFC3Q9BVG8 833 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 CHRDQ9H2X0 955 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 FZD8Q9H461 694 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 LMAN1LQ9HAT1 526 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 POLD4Q9HCU8 107 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 RBM12Q9NTZ6 932 aaKnown RBP9.57□□□□□ -0.88
VNN3-208ENST00000427187 ANKEF1Q9NU02 776 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 PRMT7Q9NVM4 692 aaPredicted RBP9.57□□□□□ -0.88
VNN3-208ENST00000427187 MRPS17Q9Y2R5 130 aaKnown RBP9.57□□□□□ -0.88
VNN3-208ENST00000427187 ZMYM2Q9UBW7 1377 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 CEP295Q9C0D2 2601 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 ASPMQ8IZT6 3477 aa9.57□□□□□ -0.88
VNN3-208ENST00000427187 PDCD11Q14690 1871 aaKnown RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 WDR27A2RRH5 827 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 CHURC1-FNTBB4DL54 471 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 PRRG1O14668 218 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 N4BP3O15049 544 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 LYPLA2O95372 231 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 BAG4O95429 457 aaKnown RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 SEC24AO95486 1093 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 LRG1P02750 347 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 PRKCBP05771 671 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 POU2F2P09086 479 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 GDI1P31150 447 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 VIPR2P41587 438 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 TXKP42681 527 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 SOX9P48436 509 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 FNTBP49356 437 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 FOSBP53539 338 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 SOX4Q06945 474 aaPredicted RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 PRPF4BQ13523 1007 aaKnown RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 SIM2Q14190 667 aaPredicted RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 GAS6Q14393 721 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 CALCRLQ16602 461 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 PRSS36Q5K4E3 855 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 HEATR6Q6AI08 1181 aaKnown RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 LAIR1Q6GTX8 287 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 PDXDC1Q6P996 788 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 CPLX2Q6PUV4 134 aaKnown RBP9.56□□□□□ -0.88
VNN3-208ENST00000427187 VITQ6UXI7 678 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 ZBTB8OSQ8IWT0 167 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 HS6ST3Q8IZP7 471 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 NETO1Q8TDF5 533 aa9.56□□□□□ -0.88
VNN3-208ENST00000427187 FAM3CQ92520 227 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms