RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 NECTIN4Q96NY8 510 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 TTPALQ9BTX7 342 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 PHF7Q9BWX1 381 aaPredicted RBP20.16■□□□□ 0.82
MSH5-207ENST00000425703 STRA6Q9BX79 667 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 KBTBD4Q9NVX7 518 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 CACNG4Q9UBN1 327 aa20.16■□□□□ 0.82
MSH5-207ENST00000425703 OGTO15294 1046 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 MEFVO15553 781 aaPredicted RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 TRAPPC3O43617 180 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 FAM189A1O60320 539 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 B3GAT3O94766 335 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 RPL9P32969 192 aaKnown RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 ME1P48163 572 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 CLCNKBP51801 687 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 AMPD3Q01432 767 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 ALCAMQ13740 583 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 SLFN12LQ6IEE8 588 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 RIN2Q8WYP3 895 aaPredicted RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 PIK3R5Q8WYR1 880 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 FBXL18Q96ME1 805 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 SFXN1Q9H9B4 322 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
MSH5-207ENST00000425703 MAGEF1Q9HAY2 307 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 PCDHA7Q9UN72 937 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 STYXL1Q9Y6J8 313 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 MYH15Q9Y2K3 1946 aa20.15■□□□□ 0.82
MSH5-207ENST00000425703 TTC26A0AVF1 554 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 ADRB2P07550 413 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 POU5F1Q01860 360 aaKnown RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 SOX4Q06945 474 aaPredicted RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 BECN1Q14457 450 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 ZC2HC1CQ53FD0 456 aaPredicted RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 HERC4Q5GLZ8 1057 aaPredicted RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 RTP2Q5QGT7 225 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 FAM171A1Q5VUB5 890 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 CNNM4Q6P4Q7 775 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 SLC39A4Q6P5W5 647 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 HASPINQ8TF76 798 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 B3GALT6Q96L58 329 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 RIPOR3Q96MK2 946 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 PYM1Q9BRP8 204 aaKnown RBP20.14■□□□□ 0.81
MSH5-207ENST00000425703 EXOC7Q9UPT5 735 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 ZDHHC9Q9Y397 364 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 ATP6V1DQ9Y5K8 247 aa20.14■□□□□ 0.81
MSH5-207ENST00000425703 LOC730098B7Z3J9 87 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 GLUD1P00367 558 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 CXCL8P10145 99 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 FGFR3P22607 806 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 MTHFRP42898 656 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 SEZ6Q53EL9 994 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 RESP18Q5W5W9 173 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 CD302Q8IX05 232 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 CCDC65Q8IXS2 484 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 CMASQ8NFW8 434 aaPredicted RBP20.13■□□□□ 0.81
MSH5-207ENST00000425703 MSTO1Q9BUK6 570 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 C1QTNF1Q9BXJ1 281 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 RHOBTB2Q9BYZ6 727 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 PANK4Q9NVE7 773 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 FAM13BQ9NYF5 915 aa20.13■□□□□ 0.81
MSH5-207ENST00000425703 PI4K2BG5E9Z4 385 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 PODXLO00592 558 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 PAPLNO95428 1278 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 IDEP14735 1019 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 CYP3A5P20815 502 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 PPP2R3AQ06190 1150 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 POSTNQ15063 836 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 ATAT1Q5SQI0 421 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 L1TD1Q5T7N2 865 aaKnown RBP20.12■□□□□ 0.81
MSH5-207ENST00000425703 CD300LGQ6UXG3 332 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 CYP26C1Q6V0L0 522 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 C15orf39Q6ZRI6 1047 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 LNX1Q8TBB1 728 aaPredicted RBP20.12■□□□□ 0.81
MSH5-207ENST00000425703 DHX58Q96C10 678 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 ACCSQ96QU6 501 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 TRIM9Q9C026 710 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 PLEKHA4Q9H4M7 779 aa20.12■□□□□ 0.81
MSH5-207ENST00000425703 RPF1Q9H9Y2 349 aaKnown RBP20.12■□□□□ 0.81
MSH5-207ENST00000425703 CPSF3Q9UKF6 684 aaKnown RBP20.12■□□□□ 0.81
MSH5-207ENST00000425703 ANKRD63C9JTQ0 380 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 ALADP13716 330 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 TNFSF9P41273 254 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 KRT85P78386 507 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 ZBTB6Q15916 424 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 ENOX2Q16206 610 aaKnown RBP20.11■□□□□ 0.81
MSH5-207ENST00000425703 PSMD5Q16401 504 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 RARS2Q5T160 578 aaKnown RBP20.11■□□□□ 0.81
MSH5-207ENST00000425703 LILRA6Q6PI73 481 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 GPR149Q86SP6 731 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 CEP57Q86XR8 500 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 C3orf58Q8NDZ4 430 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 C18orf25Q96B23 403 aaPredicted RBP20.11■□□□□ 0.81
MSH5-207ENST00000425703 APOL5Q9BWW9 433 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 MAN1C1Q9NR34 630 aa20.11■□□□□ 0.81
MSH5-207ENST00000425703 UBQLN1Q9UMX0 589 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms