RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FBXO18Q8NFZ0 1043 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
LINC01040-201ENST00000425048 RAP2AP10114 183 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 ATP5JP18859 108 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 FGFR4P22455 802 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 MRPS9P82933 396 aaKnown RBP6.74□□□□□ -1.33
LINC01040-201ENST00000425048 EPHA10Q5JZY3 1008 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 PQLC1Q8N2U9 271 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 STON2Q8WXE9 905 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 PTCD3Q96EY7 689 aaKnown RBP6.74□□□□□ -1.33
LINC01040-201ENST00000425048 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 AIFM2Q9BRQ8 373 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 KCNE5Q9UJ90 142 aa6.74□□□□□ -1.33
LINC01040-201ENST00000425048 MYADML2A6NDP7 307 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 ZEB2O60315 1214 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 RBMXL2O75526 392 aaKnown RBP6.73□□□□□ -1.33
LINC01040-201ENST00000425048 SREBF1P36956 1147 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 HSD11B2P80365 405 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 DHCR24Q15392 516 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 AUTS2Q8WXX7 1259 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 NACC2Q96BF6 587 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
LINC01040-201ENST00000425048 SLC17A6Q9P2U8 582 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 MAPRE3Q9UPY8 281 aa6.73□□□□□ -1.33
LINC01040-201ENST00000425048 MTO1Q9Y2Z2 717 aaKnown RBP6.73□□□□□ -1.33
LINC01040-201ENST00000425048 AATKQ6ZMQ8 1374 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 A0A087X0B3 334 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 WNT10BO00744 389 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 PDE8AO60658 829 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 PROP1O75360 226 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 ERBB2P04626 1255 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 MYCLP1P12525 358 aaPredicted RBP6.72□□□□□ -1.33
LINC01040-201ENST00000425048 CCT2P78371 535 aaKnown RBP6.72□□□□□ -1.33
LINC01040-201ENST00000425048 FOXF2Q12947 444 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 ADRM1Q16186 407 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 CYP2A13Q16696 494 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 MUM1L1Q5H9M0 696 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 OTUD7BQ6GQQ9 843 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 THNSL2Q86YJ6 484 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 SRRM1Q8IYB3 904 aaKnown RBP6.72□□□□□ -1.33
LINC01040-201ENST00000425048 COLGALT2Q8IYK4 626 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 ACTRT2Q8TDY3 377 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 SENP6Q9GZR1 1112 aaPredicted RBP6.72□□□□□ -1.33
LINC01040-201ENST00000425048 GREM2Q9H772 168 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 IFT22Q9H7X7 185 aa6.72□□□□□ -1.33
LINC01040-201ENST00000425048 LRRC3CA6NJW4 275 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 MGST3O14880 152 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 C1QL1O75973 258 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 CKBP12277 381 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 MTHFD2P13995 350 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 KIAA0907Q7Z7F0 614 aaPredicted RBP6.71□□□□□ -1.34
LINC01040-201ENST00000425048 TSPEARQ8WU66 669 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 TTC1Q99614 292 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 HEPHQ9BQS7 1158 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 UNKLQ9H9P5 680 aaKnown RBP6.71□□□□□ -1.34
LINC01040-201ENST00000425048 IFT122Q9HBG6 1241 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 LANCL2Q9NS86 450 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 SCOCQ9UIL1 159 aa6.71□□□□□ -1.34
LINC01040-201ENST00000425048 CCDC78A2IDD5 438 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 GOLGA8AA7E2F4 631 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 NEMP1O14524 444 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 SLC6A2P23975 617 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 VAV2P52735 878 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 ZNF529Q6P280 563 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
LINC01040-201ENST00000425048 LNX2Q8N448 690 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 KLK15Q9H2R5 256 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 KCTD5Q9NXV2 234 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
LINC01040-201ENST00000425048 TEX33O43247 280 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ERN1O75460 977 aaKnown RBP6.69□□□□□ -1.34
LINC01040-201ENST00000425048 PRSS23O95084 383 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 GUCY1A2P33402 732 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ID4P47928 161 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 MUM1Q2TAK8 710 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ANO4Q32M45 955 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 CASKIN2Q8WXE0 1202 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ANKS1AQ92625 1134 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ACE2Q9BYF1 805 aaPredicted RBP6.69□□□□□ -1.34
LINC01040-201ENST00000425048 TMEM140Q9NV12 185 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 USP25Q9UHP3 1055 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ZBTB21Q9ULJ3 1066 aa6.69□□□□□ -1.34
LINC01040-201ENST00000425048 ABCG1P45844 678 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 ALDH1A3P47895 512 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 SEM1Q6ZVN7 128 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 MICALCLQ6ZW33 695 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 MARS2Q96GW9 593 aaKnown RBP6.68□□□□□ -1.34
LINC01040-201ENST00000425048 PNKPQ96T60 521 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 QRSL1Q9H0R6 528 aaKnown RBP6.68□□□□□ -1.34
LINC01040-201ENST00000425048 LDAHQ9H6V9 325 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 FBXO34Q9NWN3 711 aa6.68□□□□□ -1.34
LINC01040-201ENST00000425048 MRPL42Q9Y6G3 142 aaKnown RBP6.68□□□□□ -1.34
LINC01040-201ENST00000425048 PEX1O43933 1283 aa6.67□□□□□ -1.34
LINC01040-201ENST00000425048 GSPT1P15170 499 aaKnown RBP6.67□□□□□ -1.34
LINC01040-201ENST00000425048 PPP3CAQ08209 521 aa6.67□□□□□ -1.34
LINC01040-201ENST00000425048 NOMO1Q15155 1222 aa6.67□□□□□ -1.34
LINC01040-201ENST00000425048 AKNAD1Q5T1N1 836 aa6.67□□□□□ -1.34
LINC01040-201ENST00000425048 FITM2Q8N6M3 262 aa6.67□□□□□ -1.34
LINC01040-201ENST00000425048 TGFBRAP1Q8WUH2 860 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms