RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 MIPEPQ99797 713 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 HEMGNQ9BXL5 484 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 NMRK1Q9NWW6 199 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 WRAP73Q9P2S5 460 aaPredicted RBP17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 C2CD2Q9Y426 696 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 ACADSP16219 412 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 MUM1Q2TAK8 710 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 DENND1AQ8TEH3 1009 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 C10orf82Q8WW14 230 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 FAM163AQ96GL9 167 aaPredicted RBP17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 DCLK3Q9C098 648 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 ASB3Q9Y575 518 aa17.75■□□□□ 0.43
NPC1L1-203ENST00000423141 GSTTP1A0A1W2PQM5 241 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 MAGEB2O15479 319 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 NPTXRO95502 500 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 RFX1P22670 979 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 SREBF1P36956 1147 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 TRABD2AQ86V40 505 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 KREMEN1Q96MU8 473 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 USP20Q9Y2K6 914 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 COL5A3P25940 1745 aaPredicted RBP17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 SORBS3O60504 671 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 GRIPAP1Q4V328 841 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 EPC2Q52LR7 807 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 PPP1R15BQ5SWA1 713 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 C1orf220Q5T0J3 134 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 PLEKHO2Q8TD55 490 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 FAM136AQ96C01 138 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 MRRFQ96E11 262 aaKnown RBP17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 ACTL7BQ9Y614 415 aa17.74■□□□□ 0.43
NPC1L1-203ENST00000423141 EDF1O60869 148 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 GAS8O95995 478 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 GZMAP12544 262 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 PKN2Q16513 984 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 TSNAXIP1Q2TAA8 658 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 WASHC2DQ5SRD0 308 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 CPSF2Q9P2I0 782 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 GTF3C4Q9UKN8 822 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 DCTN3O75935 186 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 ZNF76P36508 570 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 RASA3Q14644 834 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 LBRQ14739 615 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 STAT4Q14765 748 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 SLC1A5Q15758 541 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 SGSM1Q2NKQ1 1148 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 CMPK2Q5EBM0 449 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 IZUMO3Q5VZ72 239 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 DSTYKQ6XUX3 929 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 PPM1KQ8N3J5 372 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 RBBP8NLQ8NC74 664 aaPredicted RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 NRG4Q8WWG1 115 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 ZNF333Q96JL9 665 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 CBWD1Q9BRT8 395 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 KIAA1586Q9HCI6 787 aa17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 METTL5Q9NRN9 209 aaKnown RBP17.73■□□□□ 0.43
NPC1L1-203ENST00000423141 EXOC1LA0A1B0GW35 172 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 POC1B-GALNT4F8VUJ3 575 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 IL1R1P14778 569 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 VAMP7P51809 220 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 PLEKHG4Q58EX7 1191 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 SYDE2Q5VT97 1194 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 MTDHQ86UE4 582 aaKnown RBP17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 RBM15Q96T37 977 aaKnown RBP eCLIP17.72■□□□□ 0.436e-6■■■■□ 20.3
NPC1L1-203ENST00000423141 ZCWPW1Q9H0M4 648 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ANAPC7Q9UJX3 599 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 NEU2Q9Y3R4 380 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 MYH11P35749 1972 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 SIGLEC16A6NMB1 481 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 NVLO15381 856 aaKnown RBP17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ADRA2BP18089 450 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ALDH3A1P30838 453 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ROR2Q01974 943 aaKnown RBP17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 SPARCL1Q14515 664 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 C2CD6Q53TS8 623 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 FOXB2Q5VYV0 432 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 OTOAQ7RTW8 1153 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 CCDC77Q9BR77 488 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 NPHS2Q9NP85 383 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 UBN1Q9NPG3 1134 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ZFP69BQ9UJL9 534 aa17.72■□□□□ 0.43
NPC1L1-203ENST00000423141 ABLIM1O14639 778 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 MAGEA4P43358 317 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 FASTKD3Q14CZ7 662 aaKnown RBP17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 PDK4Q16654 411 aa17.71■□□□□ 0.43
NPC1L1-203ENST00000423141 OR52E8Q6IFG1 317 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms