RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 LMAN1P49257 510 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 CDR2Q01850 454 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 PSMD6Q15008 389 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 FAM160B1Q5W0V3 765 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 EFCAB12Q6NXP0 572 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 USP50Q70EL3 339 aaPredicted RBP9.44□□□□□ -0.9
SNCA-206ENST00000420646 HVCN1Q96D96 273 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 INTUQ9ULD6 942 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 GINS2Q9Y248 185 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 ARID2Q68CP9 1835 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 BTBD19C9JJ37 291 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 DAPK3O43293 454 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 VTNP04004 478 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 PYGMP11217 842 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 OSBPP22059 807 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 RRM1P23921 792 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 TFAMQ00059 246 aaKnown RBP9.44□□□□□ -0.9
SNCA-206ENST00000420646 MAP9Q49MG5 647 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 HSP90B2PQ58FF3 399 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 KCTD16Q68DU8 428 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 TTC19Q6DKK2 380 aaPredicted RBP9.44□□□□□ -0.9
SNCA-206ENST00000420646 ARMC9Q7Z3E5 817 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 ZNF564Q8TBZ8 553 aaPredicted RBP9.44□□□□□ -0.9
SNCA-206ENST00000420646 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 RABEP2Q9H5N1 569 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 PCDHB4Q9Y5E5 795 aa9.44□□□□□ -0.9
SNCA-206ENST00000420646 ADGRA2Q96PE1 1338 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 GOLGA6BA6NDN3 693 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 SLC25A27O95847 323 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 PRKCBP05771 671 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 FGFR4P22455 802 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 RFX1P22670 979 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 ANXA13P27216 316 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 CDR1P51861 262 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 MYL6P60660 151 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 TMEM62Q0P6H9 643 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 NCOA4Q13772 614 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 WDR44Q5JSH3 913 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 SYCE1Q8N0S2 351 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 OR2W6PQ8NHA6 318 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 PBKQ96KB5 322 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 FAM118BQ9BPY3 351 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 CNOT8Q9UFF9 292 aaKnown RBP9.43□□□□□ -0.9
SNCA-206ENST00000420646 SPOPO43791 374 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 CAPN15O75808 1086 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 TUBBP07437 444 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 INSRRP14616 1297 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 KCNJ1P48048 391 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 NOP14P78316 857 aaKnown RBP9.43□□□□□ -0.9
SNCA-206ENST00000420646 SNAPC2Q13487 334 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 PRAMEF19Q5SWL8 479 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 FASTKD5Q7L8L6 764 aaKnown RBP9.43□□□□□ -0.9
SNCA-206ENST00000420646 IFT20Q8IY31 132 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 ATP8B4Q8TF62 1192 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 ARL8AQ96BM9 186 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
SNCA-206ENST00000420646 C18orf8Q96DM3 657 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 CPB2Q96IY4 423 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 C11orf70Q9BRQ4 267 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 RNF14Q9UBS8 474 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 STYXL1Q9Y6J8 313 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 EVPLQ92817 2033 aa9.43□□□□□ -0.9
SNCA-206ENST00000420646 CCL15-CCL14A0A0B4J2E2 113 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 VGLL3A8MV65 326 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 FAM189A1O60320 539 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ACO1P21399 889 aaKnown RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 ECHS1P30084 290 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 TNNC1P63316 161 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CUL2Q13617 745 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CCL15Q16663 113 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 LDLRAD1Q5T700 205 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 USP37Q86T82 979 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 SH2D3CQ8N5H7 860 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 AFAP1L1Q8TED9 768 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 BRI3BPQ8WY22 251 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ACO2Q99798 780 aaKnown RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 LRRC4CQ9HCJ2 640 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 PTPN22Q9Y2R2 807 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ADCY6O43306 1168 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 MCM3P25205 808 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 GJC1P36383 396 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 RFC5P40937 340 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 RAP1GAPP47736 663 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 MAPK6Q16659 721 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 GPRC5AQ8NFJ5 357 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 MS4A4AQ96JQ5 239 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 PTPN18Q99952 460 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 CXCL16Q9H2A7 254 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
SNCA-206ENST00000420646 ANAPC7Q9UJX3 599 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 A0A087WZ62 844 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 PMM2O15305 246 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 TOM1L1O75674 476 aa9.42□□□□□ -0.9
SNCA-206ENST00000420646 KRT19P08727 400 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms