RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 ALKBH5Q6P6C2 394 aaKnown RBP6.51□□□□□ -1.37
CHD2-202ENST00000420239 LRRC74BQ6ZQY2 392 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 C4orf50Q6ZRC1 276 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 H2AFVQ71UI9 128 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 FBXO41Q8TF61 875 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 MAGEB18Q96M61 343 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 FGFBP2Q9BYJ0 223 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 NT5C3AQ9H0P0 336 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 TSPAN10Q9H1Z9 355 aaPredicted RBP6.51□□□□□ -1.37
CHD2-202ENST00000420239 DCLRE1BQ9H816 532 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 KCNK9Q9NPC2 374 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 ETNK2Q9NVF9 386 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 STOML1Q9UBI4 398 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 ARMCX3Q9UH62 379 aaPredicted RBP6.51□□□□□ -1.37
CHD2-202ENST00000420239 AMFRQ9UKV5 643 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 PPP1R9AQ9ULJ8 1098 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 TBC1D30Q9Y2I9 924 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 PCDHA2Q9Y5H9 948 aa6.51□□□□□ -1.37
CHD2-202ENST00000420239 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD2-202ENST00000420239 TRAFD1O14545 582 aaPredicted RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 CETN3O15182 167 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CYTH3O43739 400 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 NMT2O60551 498 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 LMNAP02545 664 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 LYNP07948 512 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CETPP11597 493 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 SMARCA1P28370 1054 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 EPHA4P54764 986 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 JAM2P57087 298 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 DYNLL1P63167 89 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 SFSWAPQ12872 951 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 PRPF4BQ13523 1007 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 MOGSQ13724 837 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 TCEAL1Q15170 157 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 EDRF1Q3B7T1 1238 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 SPDYAQ5MJ70 313 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 HYIQ5T013 277 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 DSTYKQ6XUX3 929 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 DYMQ7RTS9 669 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 NEK8Q86SG6 692 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ZDHHC14Q8IZN3 488 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CYP4X1Q8N118 509 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ALG3Q92685 438 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 GRAMD1AQ96CP6 724 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 C8orf37Q96NL8 207 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 TUBGCP5Q96RT8 1024 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 YIPF2Q9BWQ6 316 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 RBCK1Q9BYM8 510 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 PHACTR1Q9C0D0 580 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 VCX3BQ9H321 246 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 IL21Q9HBE4 155 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 VCX3AQ9NNX9 186 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 AAASQ9NRG9 546 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 RHBDL2Q9NX52 303 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 STK32BQ9NY57 414 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 TRMT112Q9UI30 125 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 NUMBLQ9Y6R0 609 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 PHLPP1O60346 1717 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 SNAP23O00161 211 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 TRAF5O00463 557 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 PODXLO00592 558 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 HNRNPRO43390 633 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 PHF2O75151 1096 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 STARD3NLO95772 234 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ZCCHC18P0CG32 403 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 RARGP13631 454 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 BRAFP15056 766 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 VCAM1P19320 739 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 STX2P32856 288 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 TECP42680 631 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 HADHBP55084 474 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 GDF10P55107 478 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 AP1B1Q10567 949 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 COASYQ13057 564 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 KPNB1Q14974 876 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 ACSBG2Q5FVE4 666 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 FRMD5Q7Z6J6 570 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ARHGAP18Q8N392 663 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 PRELID2Q8N945 189 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 SLC30A5Q8TAD4 765 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 MIPOL1Q8TD10 442 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ZNF384Q8TF68 577 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 C10orf82Q8WW14 230 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 ART4Q93070 314 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 RUNDC3BQ96NL0 473 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 SPZ1Q9BXG8 430 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 KCTD10Q9H3F6 313 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 CDC42EP4Q9H3Q1 356 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 OSGEPQ9NPF4 335 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 DCP1AQ9NPI6 582 aaPredicted RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 USP40Q9NVE5 1235 aa6.5□□□□□ -1.37
CHD2-202ENST00000420239 DDX43Q9NXZ2 648 aaKnown RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 ARPP21Q9UBL0 812 aaPredicted RBP6.5□□□□□ -1.37
CHD2-202ENST00000420239 PCYOX1Q9UHG3 505 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms