RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 SMARCAL1Q9NZC9 954 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 RBPJLQ9UBG7 517 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PARP2Q9UGN5 583 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 COG5Q9UP83 839 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SCINQ9Y6U3 715 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZNF236Q9UL36 1845 aa15.58■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PODXLO00592 558 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MSCO60682 206 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SYF2O95926 243 aaKnown RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MMEP08473 750 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 UNGP13051 313 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HSPA9P38646 679 aaKnown RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FKBP1BP68106 108 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MOGSQ13724 837 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CFAP58Q5T655 872 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 C9orf131Q5VYM1 1079 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CRELD2Q6UXH1 353 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LRIG3Q6UXM1 1119 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ILDR2Q71H61 639 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 KAT5Q92993 513 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CD101Q93033 1021 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NUP85Q9BW27 656 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TOPORSQ9NS56 1045 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ERAP1Q9NZ08 941 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ANKFY1Q9P2R3 1169 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TRPC6Q9Y210 931 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CNTNAP2Q9UHC6 1331 aa15.58■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MAGEB2O15479 319 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 STRNO43815 780 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LSM8O95777 96 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CYP1A1P04798 512 aaPredicted RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CLTAP09496 248 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NOP14P78316 857 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PTP4A2Q12974 167 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LAMC2Q13753 1193 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZNF484Q5JVG2 852 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LIN9Q5TKA1 542 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PRPF31Q8WWY3 499 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FGD4Q96M96 766 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PCDHB18PQ96TA0 734 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 POP1Q99575 1024 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 TARS2Q9BW92 718 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZNF518BQ9C0D4 1074 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GOLPH3Q9H4A6 298 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PCYOX1Q9UHG3 505 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NFU1Q9UMS0 254 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FAN1Q9Y2M0 1017 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PCDHA3Q9Y5H8 950 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ACKR2O00590 384 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SPOPO43791 374 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PHF2O75151 1096 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IL18RAPO95256 599 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PRKCBP05771 671 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GGCXP38435 758 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FNTAP49354 379 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CARSP49589 748 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RWDD2BP57060 319 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CYP1B1Q16678 543 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MPZL3Q6UWV2 235 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 IFNLR1Q8IU57 520 aaPredicted RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FAM76AQ8TAV0 307 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ACO2Q99798 780 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CNOT8Q9UFF9 292 aaKnown RBP15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 MCM3APO60318 1980 aa15.57■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GOLGA6CA6NDK9 693 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 SOCS7O14512 581 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FAM189A1O60320 539 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 RPS6KA5O75582 802 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ASS1P00966 412 aaKnown RBP15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GOLGA6DP0CG33 693 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PROZP22891 400 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ACOT2P49753 483 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FSTL1Q12841 308 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 NCOA4Q13772 614 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HLTFQ14527 1009 aaKnown RBP eCLIP15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FAM187BQ17R55 369 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 DUOXA2Q1HG44 320 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GPAT2Q6NUI2 795 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 C12orf50Q8NA57 414 aaPredicted RBP15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CASKIN2Q8WXE0 1202 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 ZNF516Q92618 1163 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 CLMNQ96JQ2 1002 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 FAM204AQ9H8W3 233 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 HOMER3Q9NSC5 361 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PRMT7Q9NVM4 692 aaPredicted RBP15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GOLGA6AQ9NYA3 693 aa15.56■□□□□ 0.08
HLA-DPA1-242ENST00000419277 GOLGA6L10A6NI86 522 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 AGPSO00116 658 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 B4GALT4O60513 344 aa15.55■□□□□ 0.08
HLA-DPA1-242ENST00000419277 PHACTR2O75167 634 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms