RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TPRNQ4KMQ1 711 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 HVCN1Q96D96 273 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 MRPL44Q9H9J2 332 aaKnown RBP22.18■■□□□ 1.14
GTF3A-202ENST00000419181 DZANK1Q9NVP4 752 aa22.18■■□□□ 1.14
GTF3A-202ENST00000419181 ADH1AP07327 375 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 CXCL8P10145 99 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 IDEP14735 1019 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 KYAT1Q16773 422 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 RTP2Q5QGT7 225 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 RESP18Q5W5W9 173 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 DCLRE1AQ6PJP8 1040 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 IQUBQ8NA54 791 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 DHX58Q96C10 678 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 POP1Q99575 1024 aaKnown RBP22.17■■□□□ 1.14
GTF3A-202ENST00000419181 APOL5Q9BWW9 433 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 PLEKHA5Q9HAU0 1116 aa22.17■■□□□ 1.14
GTF3A-202ENST00000419181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.17■■□□□ 1.14
GTF3A-202ENST00000419181 TTC26A0AVF1 554 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 OGTO15294 1046 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 B3GAT3O94766 335 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 IGFBP6P24592 240 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 TNFSF9P41273 254 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 ITIH3Q06033 890 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 ELAVL2Q12926 359 aaKnown RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 BECN1Q14457 450 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 CBX2Q14781 532 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 HERC4Q5GLZ8 1057 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 ZBTB41Q5SVQ8 909 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 FAM171A1Q5VUB5 890 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 CD300LGQ6UXG3 332 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 C3orf58Q8NDZ4 430 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 RIN2Q8WYP3 895 aaPredicted RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 STAMQ92783 540 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 DDX27Q96GQ7 796 aaKnown RBP22.16■■□□□ 1.14
GTF3A-202ENST00000419181 FBXL18Q96ME1 805 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 TTPALQ9BTX7 342 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 C1QTNF1Q9BXJ1 281 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 LRRC27Q9C0I9 530 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 ADAM7Q9H2U9 754 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 PANK4Q9NVE7 773 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 TBC1D7Q9P0N9 293 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 STYXL1Q9Y6J8 313 aa22.16■■□□□ 1.14
GTF3A-202ENST00000419181 ANKRD63C9JTQ0 380 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 PIK3R5Q8WYR1 880 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 KHSRPQ92945 711 aaKnown RBP eCLIP22.15■■□□□ 1.149e-6■□□□□ 10.6
GTF3A-202ENST00000419181 C18orf25Q96B23 403 aaPredicted RBP22.15■■□□□ 1.14
GTF3A-202ENST00000419181 CHAMP1Q96JM3 812 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 MSTO1Q9BUK6 570 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 TRIM9Q9C026 710 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 EPHX3Q9H6B9 360 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 FNIP2Q9P278 1114 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 TCHHQ07283 1943 aa22.15■■□□□ 1.14
GTF3A-202ENST00000419181 TISP43B9A030 160 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 POLR2DO15514 142 aaKnown RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 ADRB2P07550 413 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CASP5P51878 434 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 KRT85P78386 507 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CREMQ03060 361 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 KCNA1Q09470 495 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 ENOX2Q16206 610 aaKnown RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 L1TD1Q5T7N2 865 aaKnown RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CNNM4Q6P4Q7 775 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 PRSS55Q6UWB4 352 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CCDC65Q8IXS2 484 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 C12orf76Q8N812 135 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 LEO1Q8WVC0 666 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 PHF7Q9BWX1 381 aaPredicted RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 FGFBP2Q9BYJ0 223 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 IKZF4Q9H2S9 585 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 MAGEF1Q9HAY2 307 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 FAM13BQ9NYF5 915 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CDH22Q9UJ99 828 aa22.14■■□□□ 1.13
GTF3A-202ENST00000419181 CPSF3Q9UKF6 684 aaKnown RBP22.14■■□□□ 1.13
GTF3A-202ENST00000419181 ANK1P16157 1881 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 PODXLO00592 558 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 GCNT3O95395 438 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 GLUD1P00367 558 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 C1RP00736 705 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 FGFR3P22607 806 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 RPL9P32969 192 aaKnown RBP22.13■■□□□ 1.13
GTF3A-202ENST00000419181 AMPD3Q01432 767 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 PPP2R3AQ06190 1150 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 ALCAMQ13740 583 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 RARS2Q5T160 578 aaKnown RBP22.13■■□□□ 1.13
GTF3A-202ENST00000419181 SLFN12LQ6IEE8 588 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 CES5AQ6NT32 575 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 CEP57Q86XR8 500 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 LNX1Q8TBB1 728 aaPredicted RBP22.13■■□□□ 1.13
GTF3A-202ENST00000419181 SFXN1Q9H9B4 322 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 RPF1Q9H9Y2 349 aaKnown RBP22.13■■□□□ 1.13
GTF3A-202ENST00000419181 PCDHB13Q9Y5F0 798 aa22.13■■□□□ 1.13
GTF3A-202ENST00000419181 MTCL1Q9Y4B5 1905 aaKnown RBP22.13■■□□□ 1.13
GTF3A-202ENST00000419181 LOC730098B7Z3J9 87 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 MYBP10242 640 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 RPL17P18621 184 aaKnown RBP22.12■■□□□ 1.13
GTF3A-202ENST00000419181 ADSSP30520 456 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 ZBTB6Q15916 424 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 ADALQ6DHV7 355 aa22.12■■□□□ 1.13
GTF3A-202ENST00000419181 KANK3Q6NY19 840 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms