RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 TUSC3Q13454 348 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 TMEM132DQ14C87 1099 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 PSMD6Q15008 389 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 PPP2R2DQ66LE6 453 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 JADE1Q6IE81 842 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 FILIP1Q7Z7B0 1213 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 ZNF280BQ86YH2 543 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 CLP1Q92989 425 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 CCDC127Q96BQ5 260 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 TIFAQ96CG3 184 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 DNAJC25Q9H1X3 360 aa20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 UBQLN1Q9UMX0 589 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-202ENST00000418576 FNDC1Q4ZHG4 1894 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 ZC3H11AO75152 810 aaKnown RBP eCLIP20.05■□□□□ 0.85e-7■■■■□ 23.3
SEMA3B-202ENST00000418576 DDHD2O94830 711 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 GNA14O95837 355 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 ALDH2P05091 517 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 ANO6Q4KMQ2 910 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 CACTINQ8WUQ7 758 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 SRRTQ9BXP5 876 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 NKX2-4Q9H2Z4 354 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 CWH43Q9H720 699 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 NRDE2Q9H7Z3 1164 aa20.05■□□□□ 0.8
SEMA3B-202ENST00000418576 CITO14578 2027 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 DLATP10515 647 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 CYP3A5P20815 502 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 DSC1Q08554 894 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 C11orf57Q6ZUT1 292 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 COLGALT2Q8IYK4 626 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 BEST2Q8NFU1 509 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 SAMD11Q96NU1 681 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 TMEM175Q9BSA9 504 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 METTL14Q9HCE5 456 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 PCDHB12Q9Y5F1 795 aa20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 LAMA2P24043 3122 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-202ENST00000418576 NFICP08651 508 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TNNI1P19237 187 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TFAMQ00059 246 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 NAB2Q15742 525 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ZBTB6Q15916 424 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 WDR49Q8IV35 697 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ENOX1Q8TC92 643 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 UROC1Q96N76 676 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 MED15Q96RN5 788 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TGS1Q96RS0 853 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 CAVIN2O95810 425 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 OR1G1P47890 313 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 VAMP7P51809 220 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 BCAR1P56945 870 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TAP1Q03518 808 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ENPEPQ07075 957 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 DUOXA2Q1HG44 320 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 CCDC40Q4G0X9 1142 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 SPATA1Q5VX52 437 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TMC2Q8TDI7 906 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 PARD3BQ8TEW8 1205 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 DDX27Q96GQ7 796 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ANKRD36BP1Q96IX9 119 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ZNF558Q96NG5 402 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 HCSTQ9UBK5 93 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 DNAJB4Q9UDY4 337 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 ARMCX3Q9UH62 379 aaPredicted RBP20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
SEMA3B-202ENST00000418576 TMEM191BP0C7N4 346 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 BMPR1AP36894 532 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 WNT7BP56706 349 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 BFSP1Q12934 665 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 KCNT2Q6UVM3 1135 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 FRMD5Q7Z6J6 570 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 C18orf25Q96B23 403 aaPredicted RBP20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 CGRRF1Q99675 332 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 TRIOBPQ9H2D6 2365 aa20.02■□□□□ 0.8
SEMA3B-202ENST00000418576 CASTOR2A6NHX0 329 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 TNNC2P02585 160 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 GALTP07902 379 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 RPL9P32969 192 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 CTNNB1P35222 781 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 PPM1AP35813 382 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 AP3M2P53677 418 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 FAM114A1Q8IWE2 563 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 EFCAB13Q8IY85 973 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 COLGALT1Q8NBJ5 622 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 BPIFA3Q9BQP9 254 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 COLEC11Q9BWP8 271 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 PLVAPQ9BX97 442 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 INTS13Q9NVM9 706 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 TUBGCP4Q9UGJ1 667 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
SEMA3B-202ENST00000418576 IKBKBO14920 756 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 LINC00271P0C7V0 271 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 SLC11A1P49279 550 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 ZNF165P49910 485 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 ERVK-21P61565 698 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 MYL5Q02045 173 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 SOX4Q06945 474 aaPredicted RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 POP1Q99575 1024 aaKnown RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 C17orf80Q9BSJ5 609 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 THAP9Q9H5L6 903 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms