RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 CLIC2O15247 247 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 GRM6O15303 877 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 XPOTO43592 962 aaKnown RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 PRCPP42785 496 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 STIM1Q13586 685 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 ADGRE1Q14246 886 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 DDX53Q86TM3 631 aaKnown RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 ADSSL1Q8N142 457 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 MYLIPQ8WY64 445 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 MRPL38Q96DV4 380 aaKnown RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 ALG13Q9NP73 1137 aaKnown RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 RBAKQ9NYW8 714 aaPredicted RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 UBQLN1Q9UMX0 589 aaKnown RBP17.9■□□□□ 0.46
LINC00398-201ENST00000414407 MAPK8IP1Q9UQF2 711 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 C2CD2Q9Y426 696 aa17.9■□□□□ 0.46
LINC00398-201ENST00000414407 CITO14578 2027 aa17.89■□□□□ 0.46
LINC00398-201ENST00000414407 NT5C1B-RDH14C9J2C7 533 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 TMEM189-UBE2V1I3L0A0 370 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 RPL9P32969 192 aaKnown RBP17.89■□□□□ 0.45
LINC00398-201ENST00000414407 SURF1Q15526 300 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 SNRNP35Q16560 246 aaKnown RBP17.89■□□□□ 0.45
LINC00398-201ENST00000414407 EDRF1Q3B7T1 1238 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 ZCWPW2Q504Y3 356 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 CENPPQ6IPU0 288 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 PDE12Q6L8Q7 609 aaKnown RBP17.89■□□□□ 0.45
LINC00398-201ENST00000414407 SMYD4Q8IYR2 804 aaPredicted RBP17.89■□□□□ 0.45
LINC00398-201ENST00000414407 ZSWIM2Q8NEG5 633 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 POF1BQ8WVV4 589 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 KIF12Q96FN5 646 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 DHTKD1Q96HY7 919 aaPredicted RBP17.89■□□□□ 0.45
LINC00398-201ENST00000414407 MTCH2Q9Y6C9 303 aa17.89■□□□□ 0.45
LINC00398-201ENST00000414407 GOLGA8IPA6NC78 632 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 CASTOR2A6NHX0 329 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 GOLGA8JA6NMD2 632 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 EXOC3O60645 756 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 EFEMP2O95967 443 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 NR3C1P04150 777 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 FOSL2P15408 326 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 PTMSP20962 102 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 BMP6P22004 513 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 RPL13P26373 211 aaKnown RBP17.88■□□□□ 0.45
LINC00398-201ENST00000414407 LRPAP1P30533 357 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 CYP2J2P51589 502 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 SOX4Q06945 474 aaPredicted RBP17.88■□□□□ 0.45
LINC00398-201ENST00000414407 TMEM132DQ14C87 1099 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 UPP1Q16831 310 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 SPATA1Q5VX52 437 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 JADE1Q6IE81 842 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 DCLRE1AQ6PJP8 1040 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 TMEM173Q86WV6 379 aaPredicted RBP17.88■□□□□ 0.45
LINC00398-201ENST00000414407 CBWD2Q8IUF1 395 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 FAM212AQ96EL1 285 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 MARCH5Q9NX47 278 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 ADAM28Q9UKQ2 775 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 PRG3Q9Y2Y8 225 aaPredicted RBP17.88■□□□□ 0.45
LINC00398-201ENST00000414407 CDH23Q9H251 3354 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 TRANK1O15050 2925 aa17.88■□□□□ 0.45
LINC00398-201ENST00000414407 PSMA7O14818 248 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 IGFBP4P22692 258 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 DNAJB1P25685 340 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 CAMK1Q14012 370 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 FOXR2Q6PJQ5 311 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 RNF168Q8IYW5 571 aaPredicted RBP17.87■□□□□ 0.45
LINC00398-201ENST00000414407 BEST2Q8NFU1 509 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 BCL7CQ8WUZ0 217 aaPredicted RBP17.87■□□□□ 0.45
LINC00398-201ENST00000414407 C18orf25Q96B23 403 aaPredicted RBP17.87■□□□□ 0.45
LINC00398-201ENST00000414407 MFSD14AQ96MC6 490 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 PAAF1Q9BRP4 392 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 TLR9Q9NR96 1032 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 STXBP5LQ9Y2K9 1186 aa17.87■□□□□ 0.45
LINC00398-201ENST00000414407 COL4A4P53420 1690 aaPredicted RBP17.87■□□□□ 0.45
LINC00398-201ENST00000414407 BIN1O00499 593 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 PODXLO00592 558 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 MAPK13O15264 365 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 TADA2AO75478 443 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 NFICP08651 508 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 PAX3P23760 479 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 NR2F2P24468 414 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 CLCNKBP51801 687 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 LRRC63Q05C16 580 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 SPAG1Q07617 926 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 CYP24A1Q07973 514 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 ELAVL2Q12926 359 aaKnown RBP17.86■□□□□ 0.45
LINC00398-201ENST00000414407 BMS1Q14692 1282 aaKnown RBP17.86■□□□□ 0.45
LINC00398-201ENST00000414407 PSMD6Q15008 389 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 TIGD5Q53EQ6 642 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 ISM2Q6H9L7 571 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 NOC3LQ8WTT2 800 aaKnown RBP17.86■□□□□ 0.45
LINC00398-201ENST00000414407 CACTINQ8WUQ7 758 aaKnown RBP17.86■□□□□ 0.45
LINC00398-201ENST00000414407 TSG101Q99816 390 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 GOLGA2P5Q9HBQ8 144 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 NGRNQ9NPE2 291 aaKnown RBP17.86■□□□□ 0.45
LINC00398-201ENST00000414407 TUBGCP4Q9UGJ1 667 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 FRMD4BQ9Y2L6 1034 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 TRIP11Q15643 1979 aa17.86■□□□□ 0.45
LINC00398-201ENST00000414407 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 FSCN2O14926 492 aa17.85■□□□□ 0.45
LINC00398-201ENST00000414407 SF3B1O75533 1304 aaKnown RBP eCLIP17.85■□□□□ 0.45
LINC00398-201ENST00000414407 B3GAT3O94766 335 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms