RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GRAMD1CQ8IYS0 662 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 MB21D1Q8N884 522 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 DCBLD1Q8N8Z6 715 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 RAB24Q969Q5 203 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 FAM167AQ96KS9 214 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 NDC1Q9BTX1 674 aa4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P11-201ENST00000413899 ADAMTS20P59510 1910 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 GOLGA6CA6NDK9 693 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 GOLGA6BA6NDN3 693 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 GRXCR1A8MXD5 290 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 NT5C1B-RDH14C9J2C7 533 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 POMCP01189 267 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 FTH1P19P0C7X4 201 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 GOLGA6DP0CG33 693 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 HK1P19367 917 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 MAP2K6P52564 334 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF280AP59817 542 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 SNAPC2Q13487 334 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 RRP1BQ14684 758 aaKnown RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 UBXN2BQ14CS0 331 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 KHDC1Q4VXA5 237 aaKnown RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 PABPC1LQ4VXU2 614 aaKnown RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 ATXN7L2Q5T6C5 722 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF529Q6P280 563 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 DENND1CQ8IV53 801 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 IL17RDQ8NFM7 739 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 NLGN4YQ8NFZ3 816 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 OR10H5Q8NGA6 315 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 TTC8Q8TAM2 541 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 C8orf48Q96LL4 319 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 LRGUKQ96M69 825 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 MYOCQ99972 504 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 ZNF703Q9H7S9 590 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 GOLGA6AQ9NYA3 693 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 XDHP47989 1333 aa4.92□□□□□ -1.62
HMGB1P11-201ENST00000413899 LRRC14BA6NHZ5 514 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 TRIM24O15164 1050 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 FTLP02792 175 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 ALDH2P05091 517 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 MTHFD1P11586 935 aaKnown RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 ALAS1P13196 640 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 CREMQ03060 361 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 CNGB1Q14028 1251 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 GFOD2Q3B7J2 385 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 SLC4A10Q6U841 1118 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 SYT12Q8IV01 421 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 FAM193BQ96PV7 902 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 CGRRF1Q99675 332 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 ACO2Q99798 780 aaKnown RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 VRK1Q99986 396 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 SPON1Q9HCB6 807 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 C1orf112Q9NSG2 853 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 SIDT1Q9NXL6 827 aaKnown RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 RUVBL1Q9Y265 456 aaKnown RBP4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 STXBP5LQ9Y2K9 1186 aa4.91□□□□□ -1.62
HMGB1P11-201ENST00000413899 DRGXA6NNA5 263 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 DIRC3C9JPN6 131 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 PLSCR1O15162 318 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 GRM6O15303 877 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 B3GALT2O43825 422 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 MARCH6O60337 910 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 CTNND1O60716 968 aaKnown RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 TUSC2O75896 110 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 CD1AP06126 327 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 RAP2BP61225 183 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 NKX6-1P78426 367 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 CRHR2Q13324 411 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 TOB2Q14106 344 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 GBX1Q14549 363 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 METRNLQ641Q3 311 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 HEATR3Q7Z4Q2 680 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRRT2Q7Z6L0 340 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 C14orf80Q86SX3 495 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 FAM90A1Q86YD7 464 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZBTB34Q8NCN2 500 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 RNF169Q8NCN4 708 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 CDK5RAP3Q96JB5 506 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 DCLRE1CQ96SD1 692 aaKnown RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 WDCPQ9H6R7 721 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 LMBRD1Q9NUN5 540 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 FBXO34Q9NWN3 711 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 GEMIN8Q9NWZ8 242 aaKnown RBP4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 POGKQ9P215 609 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 GABBR1Q9UBS5 961 aa4.9□□□□□ -1.63
HMGB1P11-201ENST00000413899 TCRBV7S2A1N4TA0A589 114 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 B8ZZF3 427 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 F2RL2O00254 374 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC43A1O75387 559 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 UBXN7O94888 489 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 HAUS5O94927 633 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 TYRP14679 529 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 ATF3P18847 181 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 HTR1BP28222 390 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 SMARCA1P28370 1054 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 AGFG1P52594 562 aaKnown RBP4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 CHN2P52757 468 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 FLYWCH1Q4VC44 716 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 SPDYAQ5MJ70 313 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms