RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CEBPBP17676 345 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 OR1D2P34982 312 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 SSRP1Q08945 709 aaKnown RBP10.58□□□□□ -0.72
RFFL-203ENST00000413582 ELAVL2Q12926 359 aaKnown RBP10.58□□□□□ -0.72
RFFL-203ENST00000413582 UVSSAQ2YD98 709 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 TANGO2Q6ICL3 276 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 RTL10Q7L3V2 364 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 POTEDQ86YR6 584 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 ELSPBP1Q96BH3 223 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 MCRS1Q96EZ8 462 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 IER2Q9BTL4 223 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 AVENQ9NQS1 362 aaPredicted RBP10.58□□□□□ -0.72
RFFL-203ENST00000413582 RAB23Q9ULC3 237 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 NDRG2Q9UN36 371 aaKnown RBP10.58□□□□□ -0.72
RFFL-203ENST00000413582 GREB1Q4ZG55 1949 aa10.58□□□□□ -0.72
RFFL-203ENST00000413582 PDCD11Q14690 1871 aaKnown RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 SLITRK3O94933 977 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 LYPLA2O95372 231 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 THP07101 528 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 RETP07949 1114 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 FGFR3P22607 806 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 HSPA4P34932 840 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 NRLP54845 237 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 TOB2Q14106 344 aaPredicted RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 GRM2Q14416 872 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 PRSS36Q5K4E3 855 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 CDCA2Q69YH5 1023 aaPredicted RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 PRR23CQ6ZRP0 262 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 PRR23BQ6ZRT6 265 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 TPH2Q8IWU9 490 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 CELF5Q8N6W0 485 aaKnown RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 POLR3FQ9H1D9 316 aaPredicted RBP10.57□□□□□ -0.72
RFFL-203ENST00000413582 PDZD7Q9H5P4 517 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 KCNJ14Q9UNX9 436 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 CDY1Q9Y6F8 540 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 ZFYVE26Q68DK2 2539 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 FRYQ5TBA9 3013 aa10.57□□□□□ -0.72
RFFL-203ENST00000413582 CCDC194A0A1B0GVG4 234 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 ARHGEF37A1IGU5 675 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 MAN2B1O00754 1011 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 NRG2O14511 850 aaPredicted RBP10.56□□□□□ -0.72
RFFL-203ENST00000413582 CCNT1O60563 726 aaKnown RBP10.56□□□□□ -0.72
RFFL-203ENST00000413582 IGFBP6P24592 240 aaPredicted RBP10.56□□□□□ -0.72
RFFL-203ENST00000413582 RARRES1P49788 294 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 CCR3P51677 355 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 SATB1Q01826 763 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 FAM78AQ5JUQ0 283 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 PRIMPOLQ96LW4 560 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 HSD17B14Q9BPX1 270 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 EIF2AK1Q9BQI3 630 aaKnown RBP10.56□□□□□ -0.72
RFFL-203ENST00000413582 BRD9Q9H8M2 597 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 GPRC5CQ9NQ84 441 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 SEMA4GQ9NTN9 838 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 ANKEF1Q9NU02 776 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 PRMT7Q9NVM4 692 aaPredicted RBP10.56□□□□□ -0.72
RFFL-203ENST00000413582 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 BACE2Q9Y5Z0 518 aa10.56□□□□□ -0.72
RFFL-203ENST00000413582 IGF2RP11717 2491 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 LRRIQ4A6NIV6 560 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 CPLX1O14810 134 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 N4BP3O15049 544 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 USO1O60763 962 aaKnown RBP10.55□□□□□ -0.72
RFFL-203ENST00000413582 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
RFFL-203ENST00000413582 CCR2P41597 374 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 RBM25P49756 843 aaKnown RBP10.55□□□□□ -0.72
RFFL-203ENST00000413582 ROR1Q01973 937 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 DMWDQ09019 674 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 GAS6Q14393 721 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 PPP2R5DQ14738 602 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 CSRP2Q16527 193 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 FAM187BQ17R55 369 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 CD300LGQ6UXG3 332 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 PIK3AP1Q6ZUJ8 805 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 SLFN12Q8IYM2 578 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 OXER1Q8TDS5 423 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 FAM3CQ92520 227 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 TCEAL4Q96EI5 215 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 ASB16Q96NS5 453 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 NAP1L4Q99733 375 aaKnown RBP10.55□□□□□ -0.72
RFFL-203ENST00000413582 FZD8Q9H461 694 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
RFFL-203ENST00000413582 PIAS3Q9Y6X2 628 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 NCANO14594 1321 aa10.55□□□□□ -0.72
RFFL-203ENST00000413582 WDR27A2RRH5 827 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 FAM205CA6NFA0 338 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 I3L4J1 428 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 HRO43593 1189 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 MARCH6O60337 910 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 GDF9O60383 454 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 B3GAT3O94766 335 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 REC8O95072 547 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 LRG1P02750 347 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 EDN1P05305 212 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 CHRNB1P11230 501 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms