RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 KCNB1Q14721 858 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 ZBTB6Q15916 424 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 KNOP1Q1ED39 458 aaKnown RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 PLPP4Q5VZY2 271 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 LMBRD2Q68DH5 695 aaPredicted RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 SLFN12LQ6IEE8 588 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 KANK3Q6NY19 840 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 ARMCX5Q6P1M9 558 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 RBM23Q86U06 439 aaKnown RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 EFCAB13Q8IY85 973 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 VPS52Q8N1B4 723 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 PLEKHO2Q8TD55 490 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 MRPL38Q96DV4 380 aaKnown RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 KIF12Q96FN5 646 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 GZF1Q9H116 711 aaPredicted RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 IGFLR1Q9H665 355 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 TMEM206Q9H813 350 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 RPF1Q9H9Y2 349 aaKnown RBP8.4□□□□□ -1.06
CSTF2-202ENST00000413437 PDE11AQ9HCR9 933 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 HSPBP1Q9NZL4 362 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 RWDD3Q9Y3V2 267 aa8.4□□□□□ -1.06
CSTF2-202ENST00000413437 SZT2Q5T011 3432 aa8.4□□□□□ -1.07
CSTF2-202ENST00000413437 PDCD11Q14690 1871 aaKnown RBP8.4□□□□□ -1.07
CSTF2-202ENST00000413437 PRRC2BQ5JSZ5 2229 aaKnown RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 CITO14578 2027 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 C2CD2LO14523 706 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 CXCL14O95715 111 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 MYL1P05976 194 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 GARTP22102 1010 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 SCP2P22307 547 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 UPP1Q16831 310 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 APBB1IPQ7Z5R6 666 aaPredicted RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 DDX53Q86TM3 631 aaKnown RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 RNF168Q8IYW5 571 aaPredicted RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 GPD1LQ8N335 351 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 VN1R2Q8NFZ6 395 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 MICAL1Q8TDZ2 1067 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 ELMO3Q96BJ8 720 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 EEF2KMTQ96G04 330 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 TMEM169Q96HH4 297 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 POP1Q99575 1024 aaKnown RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 COLEC11Q9BWP8 271 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 ZBP1Q9H171 429 aa8.39□□□□□ -1.07
CSTF2-202ENST00000413437 TOPORSQ9NS56 1045 aaPredicted RBP8.39□□□□□ -1.07
CSTF2-202ENST00000413437 MYO7AQ13402 2215 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 UBE4BO95155 1302 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 C2orf71A6NGG8 1288 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 PODXLO00592 558 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 SPTLC1O15269 473 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 EXTL3O43909 919 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 LILRB3O75022 631 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TADA2AO75478 443 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 SLC34A2O95436 690 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 RPL17P18621 184 aaKnown RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ABCD1P33897 745 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 CA8P35219 290 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 NRIP1P48552 1158 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TFF2Q03403 129 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 KRT17Q04695 432 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 DLX2Q07687 328 aaPredicted RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 MORC3Q14149 939 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 RTP2Q5QGT7 225 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ZNF658Q5TYW1 1059 aaPredicted RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 SPATA1Q5VX52 437 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 FUT10Q6P4F1 479 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 PRSS55Q6UWB4 352 aaPredicted RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 STXBP4Q6ZWJ1 553 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TMC7Q7Z402 723 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 BRSK2Q8IWQ3 736 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ELOA2Q8IYF1 753 aaPredicted RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 OR5B17Q8NGF7 314 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ZNF516Q92618 1163 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 FBXL18Q96ME1 805 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 LMAN2LQ9H0V9 348 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 CLSTN2Q9H4D0 955 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 PLEKHA5Q9HAU0 1116 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ENTPD7Q9NQZ7 604 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 TLR9Q9NR96 1032 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 DMAC2Q9NW81 257 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 RBAKQ9NYW8 714 aaPredicted RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 ADAM28Q9UKQ2 775 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 LZTS1Q9Y250 596 aa8.38□□□□□ -1.07
CSTF2-202ENST00000413437 LAMA2P24043 3122 aaKnown RBP8.38□□□□□ -1.07
CSTF2-202ENST00000413437 VWA8A3KMH1 1905 aa8.37□□□□□ -1.07
CSTF2-202ENST00000413437 PDXKO00764 312 aa8.37□□□□□ -1.07
CSTF2-202ENST00000413437 ADAM12O43184 909 aa8.37□□□□□ -1.07
CSTF2-202ENST00000413437 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms