RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 MCM7P33993 719 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 OR1D2P34982 312 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 PUM1Q14671 1186 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMIM29-203ENST00000413013 SLC44A4Q53GD3 710 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 PADI6Q6TGC4 694 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 NPAS3Q8IXF0 933 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 INTS4Q96HW7 963 aaKnown RBP19.29■□□□□ 0.68
SMIM29-203ENST00000413013 IFT74Q96LB3 600 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 POLR3CQ9BUI4 534 aaPredicted RBP19.29■□□□□ 0.68
SMIM29-203ENST00000413013 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
SMIM29-203ENST00000413013 CDY1Q9Y6F8 540 aa19.29■□□□□ 0.68
SMIM29-203ENST00000413013 DMXL1Q9Y485 3027 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 WDR87Q6ZQQ6 2873 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 NCAM2O15394 837 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 ADAM12O43184 909 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 LRRN2O75325 713 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 MED24O75448 989 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 B3GAT3O94766 335 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 FGFR3P22607 806 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 EFNA5P52803 228 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 SAFBQ15424 915 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMIM29-203ENST00000413013 NAB2Q15742 525 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 HAUS3Q68CZ6 603 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 ANKS3Q6ZW76 656 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 SECISBP2LQ93073 1101 aaKnown RBP19.28■□□□□ 0.68
SMIM29-203ENST00000413013 LLPHQ9BRT6 129 aaKnown RBP19.28■□□□□ 0.68
SMIM29-203ENST00000413013 CCDC113Q9H0I3 377 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 LTB4R2Q9NPC1 389 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 NCDNQ9UBB6 729 aa19.28■□□□□ 0.68
SMIM29-203ENST00000413013 MRPS23Q9Y3D9 190 aaKnown RBP19.28■□□□□ 0.68
SMIM29-203ENST00000413013 DOCK6Q96HP0 2047 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 FAM170BA6NMN3 283 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 TTLL13PA6NNM8 815 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 WNT7AO00755 349 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 CYP11B2P19099 503 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 YARSP54577 528 aaKnown RBP19.27■□□□□ 0.68
SMIM29-203ENST00000413013 GLRA4Q5JXX5 417 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 ZBTB41Q5SVQ8 909 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 TPRG1Q6ZUI0 275 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 NSUN7Q8NE18 718 aaKnown RBP19.27■□□□□ 0.68
SMIM29-203ENST00000413013 ATRIPQ8WXE1 791 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 ING5Q8WYH8 240 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 TMEM60Q9H2L4 133 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 TOPORSQ9NS56 1045 aaPredicted RBP19.27■□□□□ 0.68
SMIM29-203ENST00000413013 HCFC1R1Q9NWW0 138 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 GDE1Q9NZC3 331 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 DNMT3BQ9UBC3 853 aaKnown RBP19.27■□□□□ 0.68
SMIM29-203ENST00000413013 MRPS17Q9Y2R5 130 aaKnown RBP19.27■□□□□ 0.68
SMIM29-203ENST00000413013 PCDHGA2Q9Y5H1 932 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 BACE2Q9Y5Z0 518 aa19.27■□□□□ 0.68
SMIM29-203ENST00000413013 OTOGLQ3ZCN5 2332 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 ECI2O75521 394 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 LRG1P02750 347 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 RPA1P27694 616 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 CLCNKBP51801 687 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 CSTF1Q05048 431 aaKnown RBP19.26■□□□□ 0.67
SMIM29-203ENST00000413013 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
SMIM29-203ENST00000413013 ATF7IP2Q5U623 682 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 KIFAP3Q92845 792 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 NELL2Q99435 816 aa19.26■□□□□ 0.67
SMIM29-203ENST00000413013 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.26■□□□□ 0.67
SMIM29-203ENST00000413013 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 RHOP08100 348 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 OR52Z1P0C646 297 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 MUTP22033 750 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 ELF1P32519 619 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 EEF1DP3Q658K8 133 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 MAML2Q8IZL2 1156 aaPredicted RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 GPR161Q8N6U8 529 aaKnown RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 SUMF1Q8NBK3 374 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 SPRYD3Q8NCJ5 442 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 DDX27Q96GQ7 796 aaKnown RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 PPP1R10Q96QC0 940 aaKnown RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 KIFC3Q9BVG8 833 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 CCDC94Q9BW85 323 aaPredicted RBP19.25■□□□□ 0.67
SMIM29-203ENST00000413013 FOXD4L1Q9NU39 408 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
SMIM29-203ENST00000413013 COL4A3Q01955 1670 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 FRYLO94915 3013 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 MED19A0JLT2 244 aaPredicted RBP19.24■□□□□ 0.67
SMIM29-203ENST00000413013 PRRG1O14668 218 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 SDHBP21912 280 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 UPP1Q16831 310 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 VARS2Q5ST30 1063 aaKnown RBP19.24■□□□□ 0.67
SMIM29-203ENST00000413013 ZNF852Q6ZMS4 543 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 DCLK2Q8N568 766 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 CXCL16Q9H2A7 254 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 AVENQ9NQS1 362 aaPredicted RBP19.24■□□□□ 0.67
SMIM29-203ENST00000413013 ZSCAN32Q9NX65 697 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 USP20Q9Y2K6 914 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 MTF2Q9Y483 593 aaPredicted RBP19.24■□□□□ 0.67
SMIM29-203ENST00000413013 PHLPP2Q6ZVD8 1323 aa19.24■□□□□ 0.67
SMIM29-203ENST00000413013 JAK2O60674 1132 aa19.23■□□□□ 0.67
SMIM29-203ENST00000413013 CD72P21854 359 aa19.23■□□□□ 0.67
SMIM29-203ENST00000413013 RPS9P46781 194 aaKnown RBP19.23■□□□□ 0.67
SMIM29-203ENST00000413013 DNASE1L2Q92874 299 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms