RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 ZNF280BQ86YH2 543 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 GPD1LQ8N335 351 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 TRIML1Q8N9V2 468 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 POF1BQ8WVV4 589 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 SMARCE1Q969G3 411 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 FAM161BQ96MY7 647 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 HERC2P3Q9BVR0 1158 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 NSUN3Q9H649 340 aaKnown RBP8.94□□□□□ -0.98
RPE-204ENST00000411934 SLC39A2Q9NP94 309 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 AGPAT3Q9NRZ7 376 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 ADAM28Q9UKQ2 775 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 MTUS1Q9ULD2 1270 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 TRAF3IP3Q9Y228 551 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 USP20Q9Y2K6 914 aa8.94□□□□□ -0.98
RPE-204ENST00000411934 SF3B1O75533 1304 aaKnown RBP eCLIP8.94□□□□□ -0.98
RPE-204ENST00000411934 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 NRP1O14786 923 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 TGFB1I1O43294 461 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 TRAPPC3O43617 180 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 PRPF40AO75400 957 aaKnown RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 SOD2P04179 222 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 CXCL8P10145 99 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 CTSAP10619 480 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 HARSP12081 509 aaKnown RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 CASP1P29466 404 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 HOXD13P35453 343 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 PNOCQ13519 176 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 SMC1AQ14683 1233 aaKnown RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 ZBTB6Q15916 424 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ENOX2Q16206 610 aaKnown RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 EDRF1Q3B7T1 1238 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ZNF658Q5TYW1 1059 aaPredicted RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 DCLRE1AQ6PJP8 1040 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 XXYLT1Q8NBI6 393 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 BEST2Q8NFU1 509 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 MAFAQ8NHW3 353 aaPredicted RBP8.93□□□□□ -0.98
RPE-204ENST00000411934 ZBP1Q9H171 429 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 KCTD10Q9H3F6 313 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 CERS4Q9HA82 394 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.93□□□□□ -0.98
RPE-204ENST00000411934 MARCH5Q9NX47 278 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 MIOSQ9NXC5 875 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 HSPBP1Q9NZL4 362 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 DNAJB4Q9UDY4 337 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 PCDHA5Q9Y5H7 936 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ANK1P16157 1881 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 ATG2AQ2TAZ0 1938 aa8.93□□□□□ -0.98
RPE-204ENST00000411934 TRIP11Q15643 1979 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 ZNF233A6NK53 670 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 GRM6O15303 877 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 CALUO43852 315 aaPredicted RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 B4GALT3O60512 393 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 GADD45BO75293 160 aaPredicted RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 MBD3O95983 291 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 URODP06132 367 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 PTMSP20962 102 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 IGFBP4P22692 258 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 TNFSF9P41273 254 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 OR1G1P47890 313 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 AFF1P51825 1210 aaKnown RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 OSTNP61366 133 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 LRRC63Q05C16 580 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 STIM1Q13586 685 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 CAMK1Q14012 370 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 TMEM132DQ14C87 1099 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 UPP1Q16831 310 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 ZCWPW2Q504Y3 356 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 SPATA1Q5VX52 437 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 FUT10Q6P4F1 479 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 CRELD2Q6UXH1 353 aaPredicted RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 USP37Q86T82 979 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 GLIS3Q8NEA6 775 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 CACTINQ8WUQ7 758 aaKnown RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 KIF12Q96FN5 646 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 CBWD1Q9BRT8 395 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 ALG13Q9NP73 1137 aaKnown RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 LMBRD1Q9NUN5 540 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 RBAKQ9NYW8 714 aaPredicted RBP8.92□□□□□ -0.98
RPE-204ENST00000411934 KLK14Q9P0G3 267 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 COG5Q9UP83 839 aa8.92□□□□□ -0.98
RPE-204ENST00000411934 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
RPE-204ENST00000411934 CASTOR2A6NHX0 329 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 LACTBL1A8MY62 500 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 TISP43B9A030 160 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 PODXLO00592 558 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 PSMA7O14818 248 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 SYN3O14994 580 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
RPE-204ENST00000411934 SRGAP2BP0DMP2 458 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 RPL13P26373 211 aaKnown RBP8.91□□□□□ -0.98
RPE-204ENST00000411934 PNPLA4P41247 253 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 GLUD2P49448 558 aa8.91□□□□□ -0.98
RPE-204ENST00000411934 AARSP49588 968 aaKnown RBP eCLIP8.91□□□□□ -0.98
RPE-204ENST00000411934 ACOT2P49753 483 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms