RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CCDC85BQ15834 202 aaPredicted RBP24.33■■□□□ 1.49
PTCD3-203ENST00000409783 TIGD5Q53EQ6 642 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 CD300LGQ6UXG3 332 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 MICALL1Q8N3F8 863 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 TMEM130Q8N3G9 435 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 FAM213AQ9BRX8 229 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 COLEC11Q9BWP8 271 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 SLC38A7Q9NVC3 462 aa24.33■■□□□ 1.49
PTCD3-203ENST00000409783 GOLGA8IPA6NC78 632 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 GOLGA8JA6NMD2 632 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 KIAA0391O15091 583 aaKnown RBP24.32■■□□□ 1.48
PTCD3-203ENST00000409783 LDHAP00338 332 aaKnown RBP24.32■■□□□ 1.48
PTCD3-203ENST00000409783 UPP1Q16831 310 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 CD302Q8IX05 232 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 C12orf56Q8IXR9 622 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 VPS52Q8N1B4 723 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 GPD1LQ8N335 351 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 FBXL18Q96ME1 805 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 GBP4Q96PP9 640 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 ZBP1Q9H171 429 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 NSUN3Q9H649 340 aaKnown RBP24.32■■□□□ 1.48
PTCD3-203ENST00000409783 HSPBP1Q9NZL4 362 aa24.32■■□□□ 1.48
PTCD3-203ENST00000409783 HOOK1Q9UJC3 728 aaKnown RBP24.32■■□□□ 1.48
PTCD3-203ENST00000409783 CLIC2O15247 247 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 KIF4AO95239 1232 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 SMC2O95347 1197 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 CLCNKBP51801 687 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TCEAL5Q5H9L2 206 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TAS1R1Q7RTX1 841 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 ADGRD2Q7Z7M1 963 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 BRSK2Q8IWQ3 736 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 GUF1Q8N442 669 aaKnown RBP24.31■■□□□ 1.48
PTCD3-203ENST00000409783 C3orf58Q8NDZ4 430 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 PPM1EQ8WY54 764 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 SMARCE1Q969G3 411 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 KIF12Q96FN5 646 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 UROC1Q96N76 676 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TSPAN18Q96SJ8 248 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TCF25Q9BQ70 676 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 ASB7Q9H672 318 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TUBGCP4Q9UGJ1 667 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 ADAM28Q9UKQ2 775 aa24.31■■□□□ 1.48
PTCD3-203ENST00000409783 TMEM189-UBE2V1I3L0A0 370 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 JADE1Q6IE81 842 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 PDE12Q6L8Q7 609 aaKnown RBP24.3■■□□□ 1.48
PTCD3-203ENST00000409783 HS2ST1Q7LGA3 356 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 SMYD4Q8IYR2 804 aaPredicted RBP24.3■■□□□ 1.48
PTCD3-203ENST00000409783 TMEM174Q8WUU8 243 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 FAM212AQ96EL1 285 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 GPR62Q9BZJ7 368 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 RMND1Q9NWS8 449 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 MAPK8IP1Q9UQF2 711 aa24.3■■□□□ 1.48
PTCD3-203ENST00000409783 VWA8A3KMH1 1905 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 PDXKO00764 312 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 SOD2P04179 222 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 NFICP08651 508 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 CTSAP10619 480 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 CYP3A5P20815 502 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 ZNF658Q5TYW1 1059 aaPredicted RBP24.29■■□□□ 1.48
PTCD3-203ENST00000409783 PLPP4Q5VZY2 271 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 FUT10Q6P4F1 479 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 DCLRE1AQ6PJP8 1040 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 TMC7Q7Z402 723 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 CBWD2Q8IUF1 395 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 DDX27Q96GQ7 796 aaKnown RBP24.29■■□□□ 1.48
PTCD3-203ENST00000409783 HERC2P3Q9BVR0 1158 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 NGRNQ9NPE2 291 aaKnown RBP24.29■■□□□ 1.48
PTCD3-203ENST00000409783 DMAC2Q9NW81 257 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 UBQLN1Q9UMX0 589 aaKnown RBP24.29■■□□□ 1.48
PTCD3-203ENST00000409783 DERAQ9Y315 318 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 IRAK3Q9Y616 596 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 BRWD1Q9NSI6 2320 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 PRUNE2Q8WUY3 3088 aa24.29■■□□□ 1.48
PTCD3-203ENST00000409783 HIDE1A8MVS5 230 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 LILRB3O75022 631 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 IL18RAPO95256 599 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 LRPAP1P30533 357 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 RPL9P32969 192 aaKnown RBP24.28■■□□□ 1.48
PTCD3-203ENST00000409783 GUCY2FP51841 1108 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 HYAL1Q12794 435 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 COL19A1Q14993 1142 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 COBLL1Q53SF7 1204 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 SPATA1Q5VX52 437 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 EFCAB13Q8IY85 973 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 MRPL43Q8N983 215 aaKnown RBP24.28■■□□□ 1.48
PTCD3-203ENST00000409783 MICAL1Q8TDZ2 1067 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 HASPINQ8TF76 798 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 AUTS2Q8WXX7 1259 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 ENTPD7Q9NQZ7 604 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 CHST7Q9NS84 486 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 RBAKQ9NYW8 714 aaPredicted RBP24.28■■□□□ 1.48
PTCD3-203ENST00000409783 STK39Q9UEW8 545 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 MAN1B1Q9UKM7 699 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 TRAF3IP3Q9Y228 551 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 C2CD2Q9Y426 696 aa24.28■■□□□ 1.48
PTCD3-203ENST00000409783 C2orf71A6NGG8 1288 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 PODXLO00592 558 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 TADA2AO75478 443 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 KIF20AO95235 890 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms