RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 KLF1Q13351 362 aaPredicted RBP5.8□□□□□ -1.48
CLK1-203ENST00000409769 ANO4Q32M45 955 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 C19orf54Q5BKX5 351 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 TAS1R1Q7RTX1 841 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 PRIMA1Q86XR5 153 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 CNTD1Q8N815 330 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 COG1Q8WTW3 980 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 SSH1Q8WYL5 1049 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 MYEOVQ96EZ4 313 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 RRP7BPQ9NSQ0 103 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 EVLQ9UI08 416 aaPredicted RBP5.8□□□□□ -1.48
CLK1-203ENST00000409769 USP18Q9UMW8 372 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 EIF2AK4Q9P2K8 1649 aaKnown RBP5.8□□□□□ -1.48
CLK1-203ENST00000409769 UNC13BO14795 1591 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 DIP2CQ9Y2E4 1556 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 KIF15Q9NS87 1388 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 KDM5DQ9BY66 1539 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 MAGI2Q86UL8 1455 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 DEPDC5O75140 1603 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 GAGE12BA1L429 117 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 GAGE12HA6NDE8 117 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 DIRC3C9JPN6 131 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 SCAF4O95104 1147 aaKnown RBP5.79□□□□□ -1.48
CLK1-203ENST00000409769 NR4A1P22736 598 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 LGALS4P56470 323 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 CD69Q07108 199 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 VPS72Q15906 364 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 MUM1Q2TAK8 710 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 GJC2Q5T442 439 aaPredicted RBP5.79□□□□□ -1.48
CLK1-203ENST00000409769 CMIPQ8IY22 773 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 CBARPQ8N350 705 aaPredicted RBP5.79□□□□□ -1.48
CLK1-203ENST00000409769 PIK3C3Q8NEB9 887 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 OR52N2Q8NGI0 321 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 OR5M3Q8NGP4 307 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 VOPP1Q96AW1 172 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 IL17RAQ96F46 866 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 GPATCH3Q96I76 525 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 MLST8Q9BVC4 326 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 ING3Q9NXR8 418 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 EIF2B4Q9UI10 523 aaKnown RBP5.79□□□□□ -1.48
CLK1-203ENST00000409769 HDAC5Q9UQL6 1122 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 ERBINQ96RT1 1412 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 ANKRD50Q9ULJ7 1429 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 REREQ9P2R6 1566 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 PCSK5Q92824 1860 aa5.79□□□□□ -1.48
CLK1-203ENST00000409769 SPAG9O60271 1321 aaKnown RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 WASHC2AQ641Q2 1341 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 STC2O76061 302 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 NUDT3O95989 172 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 LPLP06858 475 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 LTA4HP09960 611 aaKnown RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 NCLP19338 710 aaKnown RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 IBSPP21815 317 aaPredicted RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 MTNR1BP49286 362 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 GUCY2FP51841 1108 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 SCAND1P57086 179 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 MRPL49Q13405 166 aaKnown RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 SYDE2Q5VT97 1194 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 LMBR1LQ6UX01 489 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 TSPEARQ8WU66 669 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 AUTS2Q8WXX7 1259 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 SIGLEC1Q9BZZ2 1709 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 CYP4F11Q9HBI6 524 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 ZNF277Q9NRM2 450 aaPredicted RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 YEATS2Q9ULM3 1422 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 ARHGEF40Q8TER5 1519 aa5.78□□□□□ -1.48
CLK1-203ENST00000409769 DHX57Q6P158 1386 aaKnown RBP5.78□□□□□ -1.48
CLK1-203ENST00000409769 MROH1Q8NDA8 1641 aa5.77□□□□□ -1.48
CLK1-203ENST00000409769 RNF17Q9BXT8 1623 aaKnown RBP5.77□□□□□ -1.48
CLK1-203ENST00000409769 GRID2IPA4D2P6 1211 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 GZMKP49863 264 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 DUSP2Q05923 314 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 VRK3Q8IV63 474 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 NDC1Q9BTX1 674 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 RIOX1Q9H6W3 641 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 CCM2LQ9NUG4 571 aaPredicted RBP5.77□□□□□ -1.49
CLK1-203ENST00000409769 TYW1Q9NV66 732 aaKnown RBP5.77□□□□□ -1.49
CLK1-203ENST00000409769 ZNHIT2Q9UHR6 403 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 SCOCQ9UIL1 159 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 DHX29Q7Z478 1369 aaKnown RBP5.77□□□□□ -1.49
CLK1-203ENST00000409769 A2MP01023 1474 aa5.77□□□□□ -1.49
CLK1-203ENST00000409769 WASHC2CQ9Y4E1 1318 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 VWDEQ8N2E2 1590 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 AGLP35573 1532 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 PRDM15P57071 1507 aaPredicted RBP5.76□□□□□ -1.49
CLK1-203ENST00000409769 ZAR1LA6NP61 321 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 RNASET2O00584 256 aaKnown RBP5.76□□□□□ -1.49
CLK1-203ENST00000409769 TMEM127O75204 238 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 HSP90B1P14625 803 aaKnown RBP5.76□□□□□ -1.49
CLK1-203ENST00000409769 AVPR1BP47901 424 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 SLC5A3P53794 718 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 USP14P54578 494 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 MGAT5Q09328 741 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 MTMR1Q13613 665 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 CCDC142Q17RM4 750 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 FAM214AQ32MH5 1076 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 HECTD2Q5U5R9 776 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 BTNL9Q6UXG8 535 aa5.76□□□□□ -1.49
CLK1-203ENST00000409769 FATE1Q969F0 183 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms