RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 F8W810 466 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 SMC2O95347 1197 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 EFEMP2O95967 443 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 SOX4Q06945 474 aaPredicted RBP21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 BMS1Q14692 1282 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 SAAL1Q96ER3 474 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 DDX27Q96GQ7 796 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 GSDMAQ96QA5 445 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 FAM213AQ9BRX8 229 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 ASB7Q9H672 318 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 CGNQ9P2M7 1197 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 ADAM28Q9UKQ2 775 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 PCDHGC5Q9Y5F6 944 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 PLXNA4Q9HCM2 1894 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 TRIP11Q15643 1979 aa21.58■■□□□ 1.05
PDLIM2-207ENST00000409417 BRWD1Q9NSI6 2320 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 EXTL3O43909 919 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 ZBTB6Q15916 424 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 UPP1Q16831 310 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 DCLRE1AQ6PJP8 1040 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 ZSWIM2Q8NEG5 633 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 SPATA20Q8TB22 786 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 C18orf25Q96B23 403 aaPredicted RBP21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 FAM212AQ96EL1 285 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 KIF12Q96FN5 646 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 ZBP1Q9H171 429 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 PCIF1Q9H4Z3 704 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 GOLGA2P5Q9HBQ8 144 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 RMND1Q9NWS8 449 aa21.58■■□□□ 1.04
PDLIM2-207ENST00000409417 TADA2AO75478 443 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 KIF20AO95235 890 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 KIF4AO95239 1232 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 RPL9P32969 192 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 CLCNKBP51801 687 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 SPAG1Q07617 926 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 SMC1AQ14683 1233 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 PLPP4Q5VZY2 271 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 RNF168Q8IYW5 571 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 MRPL43Q8N983 215 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 GOLGA5Q8TBA6 731 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 GBP4Q96PP9 640 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 HSPBP1Q9NZL4 362 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 UBQLN1Q9UMX0 589 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 PCDHA5Q9Y5H7 936 aa21.57■■□□□ 1.04
PDLIM2-207ENST00000409417 TMEM189-UBE2V1I3L0A0 370 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 B3GAT3O94766 335 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 IL18RAPO95256 599 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 SOD2P04179 222 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 CTSAP10619 480 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 CYP3A5P20815 502 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 SKIV2LQ15477 1246 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 FUT10Q6P4F1 479 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 GPD1LQ8N335 351 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 SMARCE1Q969G3 411 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 DERAQ9Y315 318 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 C2CD2Q9Y426 696 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 IRAK3Q9Y616 596 aa21.56■■□□□ 1.04
PDLIM2-207ENST00000409417 SF3B1O75533 1304 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 GOLGA8IPA6NC78 632 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 C2orf71A6NGG8 1288 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 GOLGA8JA6NMD2 632 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 NCK2O43639 380 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 CXCL14O95715 111 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 HYAL1Q12794 435 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 COL19A1Q14993 1142 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 JADE1Q6IE81 842 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 ADGRD2Q7Z7M1 963 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 BRSK2Q8IWQ3 736 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 C12orf56Q8IXR9 622 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 GPR62Q9BZJ7 368 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 KCTD10Q9H3F6 313 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 TLE6Q9H808 572 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 KIAA1586Q9HCI6 787 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 RBAKQ9NYW8 714 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 TUBGCP4Q9UGJ1 667 aa21.55■■□□□ 1.04
PDLIM2-207ENST00000409417 PODXLO00592 558 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 PDXKO00764 312 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 CLIC2O15247 247 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 XPOTO43592 962 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 ELAVL2Q12926 359 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 TMEM132DQ14C87 1099 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 GUF1Q8N442 669 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 HASPINQ8TF76 798 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 TMEM174Q8WUU8 243 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 ERCC4Q92889 916 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 FBXL18Q96ME1 805 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 HERC2P3Q9BVR0 1158 aa21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 GTPBP4Q9BZE4 634 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-207ENST00000409417 ZNF233A6NK53 670 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 NFICP08651 508 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 NRIP1P48552 1158 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 USP41Q3LFD5 358 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 SPATA1Q5VX52 437 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 CD300LGQ6UXG3 332 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 RBM23Q86U06 439 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 XXYLT1Q8NBI6 393 aa21.53■■□□□ 1.04
PDLIM2-207ENST00000409417 NOC3LQ8WTT2 800 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms