RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 CACNG4Q9UBN1 327 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 PUF60Q9UHX1 559 aaKnown RBP22.07■■□□□ 1.12
PTCD3-202ENST00000409326 MAN1B1Q9UKM7 699 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 MAPK8IP1Q9UQF2 711 aa22.07■■□□□ 1.12
PTCD3-202ENST00000409326 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.07■■□□□ 1.12
PTCD3-202ENST00000409326 REV3LO60673 3130 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 GOLGA8IPA6NC78 632 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 GOLGA8JA6NMD2 632 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 PDXKO00764 312 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 SOX4Q06945 474 aaPredicted RBP22.06■■□□□ 1.12
PTCD3-202ENST00000409326 HSP90AA2PQ14568 343 aaPredicted RBP22.06■■□□□ 1.12
PTCD3-202ENST00000409326 CAMK4Q16566 473 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 TMEM174Q8WUU8 243 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 FAM212AQ96EL1 285 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 KIF12Q96FN5 646 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 FBXL18Q96ME1 805 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 UROC1Q96N76 676 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 PAAF1Q9BRP4 392 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 COLEC11Q9BWP8 271 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 ASB7Q9H672 318 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 KIAA1586Q9HCI6 787 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 TLR9Q9NR96 1032 aa22.06■■□□□ 1.12
PTCD3-202ENST00000409326 RBAKQ9NYW8 714 aaPredicted RBP22.06■■□□□ 1.12
PTCD3-202ENST00000409326 COL6A3P12111 3177 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 IL18RAPO95256 599 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 SPAG1Q07617 926 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 ZBTB6Q15916 424 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 DDX53Q86TM3 631 aaKnown RBP22.05■■□□□ 1.12
PTCD3-202ENST00000409326 XXYLT1Q8NBI6 393 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 NOC3LQ8WTT2 800 aaKnown RBP22.05■■□□□ 1.12
PTCD3-202ENST00000409326 C18orf25Q96B23 403 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-202ENST00000409326 GOLGA2P5Q9HBQ8 144 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 STK39Q9UEW8 545 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 UBQLN1Q9UMX0 589 aaKnown RBP22.05■■□□□ 1.12
PTCD3-202ENST00000409326 TRAF3IP3Q9Y228 551 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 DERAQ9Y315 318 aa22.05■■□□□ 1.12
PTCD3-202ENST00000409326 VWA8A3KMH1 1905 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 F8W810 466 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 XPOTO43592 962 aaKnown RBP22.04■■□□□ 1.12
PTCD3-202ENST00000409326 CYP3A5P20815 502 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 PRCPP42785 496 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 CYP2J2P51589 502 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 UPP1Q16831 310 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 TIGD5Q53EQ6 642 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 JADE1Q6IE81 842 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 SLC9A9Q8IVB4 645 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 GPT2Q8TD30 523 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 RABGGTAQ92696 567 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 DDX27Q96GQ7 796 aaKnown RBP22.04■■□□□ 1.12
PTCD3-202ENST00000409326 KIAA1468Q9P260 1216 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 TUBGCP4Q9UGJ1 667 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 ADAM28Q9UKQ2 775 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 C2CD2Q9Y426 696 aa22.04■■□□□ 1.12
PTCD3-202ENST00000409326 ZNF233A6NK53 670 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 TMEM189-UBE2V1I3L0A0 370 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 FSCN2O14926 492 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 CALUO43852 315 aaPredicted RBP22.03■■□□□ 1.12
PTCD3-202ENST00000409326 CSPG5O95196 566 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 KIF4AO95239 1232 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 EFEMP2O95967 443 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 NFICP08651 508 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 CLCNKBP51801 687 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 ERVFC1P60507 584 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 MORC3Q14149 939 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 TMEM132DQ14C87 1099 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 NFIL3Q16649 462 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 NT5DC4Q86YG4 428 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 CBWD2Q8IUF1 395 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 VN1R3Q9BXE9 311 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 NUP62CLQ9H1M0 184 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 DMAC2Q9NW81 257 aa22.03■■□□□ 1.12
PTCD3-202ENST00000409326 NR3C1P04150 777 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 BMP6P22004 513 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 RPL9P32969 192 aaKnown RBP22.02■■□□□ 1.12
PTCD3-202ENST00000409326 IRS1P35568 1242 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 WNT7BP56706 349 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 MYBPC2Q14324 1141 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 SNRNP35Q16560 246 aaKnown RBP22.02■■□□□ 1.12
PTCD3-202ENST00000409326 ZCWPW2Q504Y3 356 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 SPATA1Q5VX52 437 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 ISM2Q6H9L7 571 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 PDE12Q6L8Q7 609 aaKnown RBP22.02■■□□□ 1.12
PTCD3-202ENST00000409326 FUT10Q6P4F1 479 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 EFCAB13Q8IY85 973 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 RNF168Q8IYW5 571 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-202ENST00000409326 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 VPS52Q8N1B4 723 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 TRIML1Q8N9V2 468 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 TCF25Q9BQ70 676 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 ZBP1Q9H171 429 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 NSUN3Q9H649 340 aaKnown RBP22.02■■□□□ 1.12
PTCD3-202ENST00000409326 SCN1AP35498 2009 aa22.02■■□□□ 1.12
PTCD3-202ENST00000409326 BIN1O00499 593 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 PODXLO00592 558 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 EXOC3O60645 756 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 TADA2AO75478 443 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 B3GAT3O94766 335 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 MBD3O95983 291 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 SOD2P04179 222 aa22.01■■□□□ 1.11
PTCD3-202ENST00000409326 LRPAP1P30533 357 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms