RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 FAM213AQ9BRX8 229 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 COLEC11Q9BWP8 271 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 VN1R3Q9BXE9 311 aa15.87■□□□□ 0.13
CDPF1-203ENST00000404583 NSUN3Q9H649 340 aaKnown RBP15.87■□□□□ 0.13
CDPF1-203ENST00000404583 CLIC2O15247 247 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 ADRB2P07550 413 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 IGFBP6P24592 240 aaPredicted RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 HSP90AA2PQ14568 343 aaPredicted RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 KNOP1Q1ED39 458 aaKnown RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TIGD5Q53EQ6 642 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TCEAL5Q5H9L2 206 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 PLPP4Q5VZY2 271 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TMC7Q7Z402 723 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 VPS52Q8N1B4 723 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TMEM130Q8N3G9 435 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 HASPINQ8TF76 798 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 KIF12Q96FN5 646 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TCF25Q9BQ70 676 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 ENTPD7Q9NQZ7 604 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 HOOK1Q9UJC3 728 aaKnown RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 PCDHA5Q9Y5H7 936 aa15.86■□□□□ 0.13
CDPF1-203ENST00000404583 TCF20Q9UGU0 1960 aaKnown RBP15.86■□□□□ 0.13
CDPF1-203ENST00000404583 FSCN2O14926 492 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 TADA2AO75478 443 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 LDHAP00338 332 aaKnown RBP15.85■□□□□ 0.13
CDPF1-203ENST00000404583 CLCNKBP51801 687 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 TAS1R1Q7RTX1 841 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 ADGRD2Q7Z7M1 963 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
CDPF1-203ENST00000404583 GBP4Q96PP9 640 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 AGPAT3Q9NRZ7 376 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 SLC38A7Q9NVC3 462 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 HSPBP1Q9NZL4 362 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 ADAM28Q9UKQ2 775 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 MAPK8IP1Q9UQF2 711 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
CDPF1-203ENST00000404583 EXTL3O43909 919 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 KIF4AO95239 1232 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 SMC2O95347 1197 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 SKIV2LQ15477 1246 aaKnown RBP15.85■□□□□ 0.13
CDPF1-203ENST00000404583 ZBTB6Q15916 424 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 UPP1Q16831 310 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 JADE1Q6IE81 842 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 CD302Q8IX05 232 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 GPD1LQ8N335 351 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 SPATA20Q8TB22 786 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 AUTS2Q8WXX7 1259 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 SMARCE1Q969G3 411 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 UROC1Q96N76 676 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 GSDMAQ96QA5 445 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 GPR62Q9BZJ7 368 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 ZBP1Q9H171 429 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 KCTD10Q9H3F6 313 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 LMBRD1Q9NUN5 540 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 TUBGCP4Q9UGJ1 667 aa15.85■□□□□ 0.13
CDPF1-203ENST00000404583 BRWD1Q9NSI6 2320 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 HIDE1A8MVS5 230 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 CXCL14O95715 111 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 EFEMP2O95967 443 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 CTSAP10619 480 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 CA8P35219 290 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 GTF2F1P35269 517 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 CYP2J2P51589 502 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 WNT7BP56706 349 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 SNRPFP62306 86 aaKnown RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 PDE12Q6L8Q7 609 aaKnown RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 FUT10Q6P4F1 479 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 DCLRE1AQ6PJP8 1040 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 SMYD4Q8IYR2 804 aaPredicted RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 IGFLR1Q9H665 355 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
CDPF1-203ENST00000404583 RMND1Q9NWS8 449 aa15.84■□□□□ 0.13
CDPF1-203ENST00000404583 PODXLO00592 558 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 PER2O15055 1255 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 KIAA0391O15091 583 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 B3GAT3O94766 335 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 SOD2P04179 222 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 NFICP08651 508 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 GUCY2FP51841 1108 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 HYAL1Q12794 435 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 SMC1AQ14683 1233 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 ISM2Q6H9L7 571 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 CD300LGQ6UXG3 332 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 CBWD2Q8IUF1 395 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 BRSK2Q8IWQ3 736 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 RNF168Q8IYW5 571 aaPredicted RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 MRPL43Q8N983 215 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 C3orf58Q8NDZ4 430 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 ASB7Q9H672 318 aa15.83■□□□□ 0.12
CDPF1-203ENST00000404583 RBAKQ9NYW8 714 aaPredicted RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 CGNQ9P2M7 1197 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 UBQLN1Q9UMX0 589 aaKnown RBP15.83■□□□□ 0.12
CDPF1-203ENST00000404583 VWA8A3KMH1 1905 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 C2orf71A6NGG8 1288 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms