RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 MAST4O15021 2626 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 ADAM12O43184 909 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 CHMP2AO43633 222 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 GAS7O60861 476 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 SRGAP2CP0DJJ0 459 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 PSMC3P17980 439 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 FCARP24071 287 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 GDI1P31150 447 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 CIITAP33076 1130 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 RAB33AQ14088 237 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 LRRC32Q14392 662 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 PSMD5Q16401 504 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 FAM78AQ5JUQ0 283 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 FAM171A1Q5VUB5 890 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
NUP43-204ENST00000403890 PDXDC1Q6P996 788 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 MICU3Q86XE3 530 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 RDM1Q8NG50 284 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 RUFY2Q8WXA3 655 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 SCNM1Q9BWG6 230 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 APOL6Q9BWW8 343 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 EIF2AQ9BY44 585 aaKnown RBP10.34□□□□□ -0.75
NUP43-204ENST00000403890 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
NUP43-204ENST00000403890 VPS45Q9NRW7 570 aa10.34□□□□□ -0.75
NUP43-204ENST00000403890 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 AKAP13Q12802 2813 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 RNF40O75150 1001 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 RPP40O75818 363 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 ERLIN2O94905 339 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 TOP3BO95985 862 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 CEBPBP17676 345 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 PTPN2P17706 415 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 AXLP30530 894 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 OR1D2P34982 312 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 RBM25P49756 843 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 MLLT6P55198 1093 aaPredicted RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 NCBP1Q09161 790 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 HSP90AA2PQ14568 343 aaPredicted RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 SOWAHCQ53LP3 525 aaPredicted RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 DGKKQ5KSL6 1271 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 DAB2IPQ5VWQ8 1189 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 B4GALNT3Q6L9W6 998 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 C1orf228Q6PIY5 440 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 KBTBD6Q86V97 674 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 CHD1LQ86WJ1 897 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 HACE1Q8IYU2 909 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 GSTCDQ8NEC7 633 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 GAB3Q8WWW8 586 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 PRPF31Q8WWY3 499 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 LENG9Q96B70 501 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 CCDC51Q96ER9 411 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 UNC45AQ9H3U1 944 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 SMOC1Q9H4F8 434 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 RBM12Q9NTZ6 932 aaKnown RBP10.33□□□□□ -0.76
NUP43-204ENST00000403890 WDR81Q562E7 1941 aa10.33□□□□□ -0.76
NUP43-204ENST00000403890 C4orf47A7E2U8 309 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ZNF263O14978 683 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 MSH4O15457 936 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ZIC2O95409 532 aaPredicted RBP10.32□□□□□ -0.76
NUP43-204ENST00000403890 CEACAM1P13688 526 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 MPLP40238 635 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 LAMTOR4Q0VGL1 99 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 FUT2Q10981 343 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ELAVL2Q12926 359 aaKnown RBP10.32□□□□□ -0.76
NUP43-204ENST00000403890 GRIK3Q13003 919 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 PCBP1Q15365 356 aaKnown RBP eCLIP10.32□□□□□ -0.76
NUP43-204ENST00000403890 LRCH2Q5VUJ6 765 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 NOTUMQ6P988 496 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 VITQ6UXI7 678 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 Q6ZS52 159 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ANO5Q75V66 913 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 MIER3Q7Z3K6 550 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 HASPINQ8TF76 798 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 DEPDC1BQ8WUY9 529 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 PSPC1Q8WXF1 523 aaKnown RBP10.32□□□□□ -0.76
NUP43-204ENST00000403890 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 MSANTD3Q96H12 275 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ASB16Q96NS5 453 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 EDEM2Q9BV94 578 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 PRR14Q9BWN1 585 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 TEKT3Q9BXF9 490 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 TRIM6Q9C030 488 aaPredicted RBP10.32□□□□□ -0.76
NUP43-204ENST00000403890 CSRNP2Q9H175 543 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 RBM28Q9NW13 759 aaKnown RBP10.32□□□□□ -0.76
NUP43-204ENST00000403890 C2orf42Q9NWW7 574 aa10.32□□□□□ -0.76
NUP43-204ENST00000403890 ITPR1Q14643 2758 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 CCDC163A0A0D9SF12 145 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 ZNF197O14709 1029 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 ASAP2O43150 1006 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 MICAL2O94851 1124 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 CCDC192P0DO97 292 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 CSRP1P21291 193 aaKnown RBP10.31□□□□□ -0.76
NUP43-204ENST00000403890 AKAP5P24588 427 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 HOXC13P31276 330 aa10.31□□□□□ -0.76
NUP43-204ENST00000403890 NUDT18Q6ZVK8 323 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms