RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 WNK4Q96J92 1243 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ZBTB45Q96K62 511 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 MSTO1Q9BUK6 570 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 TARS2Q9BW92 718 aaKnown RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ADAM33Q9BZ11 813 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 TRIM7Q9C029 511 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 GPR88Q9GZN0 384 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 PABPC3Q9H361 631 aaKnown RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 AS3MTQ9HBK9 375 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 SLC38A10Q9HBR0 1119 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 GGT7Q9UJ14 662 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ANAPC5Q9UJX4 755 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF148Q9UQR1 794 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 NCANO14594 1321 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 HLA-DRAP01903 254 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 NEFHP12036 1026 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 FMO1Q01740 532 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 TRPC3Q13507 836 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 MYBPC2Q14324 1141 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 NEDD9Q14511 834 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 C6orf118Q5T5N4 469 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 MIS18BP1Q6P0N0 1132 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 CD302Q8IX05 232 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 TMEM161BQ8NDZ6 487 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 GDAP1Q8TB36 358 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 C7orf43Q8WVR3 580 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 BSNDQ8WZ55 320 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 N4BP2L2Q92802 583 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 CCDC77Q9BR77 488 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ANKEF1Q9NU02 776 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 CNOT7Q9UIV1 285 aaKnown RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 HACL1Q9UJ83 578 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 GTF3C4Q9UKN8 822 aa8.21□□□□□ -1.1
HDAC9-201ENST00000401921 TTC7AQ9ULT0 858 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF536O15090 1300 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 KIAA0391O15091 583 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 DGAT1O75907 488 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 GJB6O95452 261 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 GZMAP12544 262 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ADSSP30520 456 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ACTR2P61160 394 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SLMAPQ14BN4 828 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SEPT7Q16181 437 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 KYNUQ16719 465 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 AGBL2Q5U5Z8 902 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 AP1ARQ63HQ0 302 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 DUPD1Q68J44 220 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ACAD10Q6JQN1 1059 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 NCAPG2Q86XI2 1143 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 FAM71AQ8IYT1 594 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 MIEF2Q96C03 454 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 RBAKQ9NYW8 714 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 UVRAGQ9P2Y5 699 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SYNPO2Q9UMS6 1093 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CNTNAP1P78357 1384 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SLX4Q8IY92 1834 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 POC1B-GALNT4F8VUJ3 575 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 GOLGA8SH3BPF8 625 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 VWA5AO00534 786 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 GNA15P30679 374 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ELF1P32519 619 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 BPIFB4P59827 614 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 TFAMQ00059 246 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CYP24A1Q07973 514 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ADCY2Q08462 1091 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 BYSLQ13895 437 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 NFIL3Q16649 462 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 DALRD3Q5D0E6 543 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 PNMA8AQ86V59 439 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 LMO3Q8TAP4 145 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 C9orf72Q96LT7 481 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 RUNDC3BQ96NL0 473 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 RPS6KC1Q96S38 1066 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 PPP1R16BQ96T49 567 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 PRMT1Q99873 361 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 KIAA1683Q9H0B3 1180 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 NSRP1Q9H0G5 558 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 NXF1Q9UBU9 619 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 AGTPBP1Q9UPW5 1226 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SCN9AQ15858 1988 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 UBR3Q6ZT12 1888 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 TLR3O15455 904 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 PEX10O60683 326 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ECHS1P30084 290 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 GMPSP49915 693 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 DYNLT1P63172 113 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 IRX1P78414 480 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 FAM133BQ5BKY9 247 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 C11orf63Q6NUN7 778 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 TTC27Q6P3X3 843 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CDR2LQ86X02 465 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CCDC60Q8IWA6 550 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 THNSL1Q8IYQ7 743 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CCDC197Q8NCU1 140 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF280CQ8ND82 737 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 SHC3Q92529 594 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms