RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TMEM59LQ9UK28 342 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 COG5Q9UP83 839 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 H3BRB1 525 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 MMP3P08254 477 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 MCM3P25205 808 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 HUNKP57058 714 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 GPC5P78333 572 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 BIRC3Q13489 604 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 AMHR2Q16671 573 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 PEX26Q7Z412 305 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 UBE2Q2Q8WVN8 375 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 TAF4BQ92750 862 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ARID3AQ99856 593 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 TUT1Q9H6E5 874 aaKnown RBP13.18□□□□□ -0.3
CLIP4-203ENST00000401617 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-203ENST00000401617 SLC5A4Q9NY91 659 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 MANSC4A6NHS7 340 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ERLIN1O75477 346 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 CLTAP09496 248 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 HOXC6P09630 235 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ZNF286BP0CG31 522 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 PHKA2P46019 1235 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 BPIFB4P59827 614 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 CUL2Q13617 745 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 DAAM2Q86T65 1068 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 RASGEF1CQ8N431 466 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 UBR7Q8N806 425 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 L1RE1Q9UN81 338 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 PCDHB2Q9Y5E7 798 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 INO80B-WBP1J3KQ70 363 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 KCNK3O14649 394 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 MAP2K7O14733 419 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 B4GALT5O43286 388 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ADCY6O43306 1168 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 B4GALT4O60513 344 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 SASH3O75995 380 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ASS1P00966 412 aaKnown RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 CYP1A2P05177 515 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 HARSP12081 509 aaKnown RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 POU5F1Q01860 360 aaKnown RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 MAP2K5Q13163 448 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 NCOA4Q13772 614 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 GLE1Q53GS7 698 aaKnown RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 MARCH8Q5T0T0 291 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 ACAD10Q6JQN1 1059 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 C11orf63Q6NUN7 778 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 MTHFD1LQ6UB35 978 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 USP6NLQ92738 828 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
CLIP4-203ENST00000401617 CPA4Q9UI42 421 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
CLIP4-203ENST00000401617 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
CLIP4-203ENST00000401617 KRT5P13647 590 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
CLIP4-203ENST00000401617 IGBP1P78318 339 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 DGKDQ16760 1214 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 DUOXA2Q1HG44 320 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 CDT1Q9H211 546 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
CLIP4-203ENST00000401617 TTC7AQ9ULT0 858 aaPredicted RBP13.16□□□□□ -0.3
CLIP4-203ENST00000401617 A0A087WZ62 844 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 IGHA2P01877 340 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 UNGP13051 313 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 TMOD1P28289 359 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 ZNF568Q3ZCX4 644 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CCDC70Q6NSX1 233 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 FDXACB1Q9BRP7 624 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 GNEQ9Y223 722 aaKnown RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 A6NJR5 290 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CYP1A1P04798 512 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 ZNF132P52740 706 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms