RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 FANCLQ9NW38 375 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 DTNAQ9Y4J8 743 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 PCDHGA3Q9Y5H0 932 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 SYNGAP1Q96PV0 1343 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 MEI4A8MW99 385 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 MCF2P10911 925 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 COPS7BQ9H9Q2 264 aaPredicted RBP11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 PCDHA7Q9UN72 937 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 GPR182O15218 404 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 HSPA4LO95757 839 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 CYP2D6P10635 497 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 CTSEP14091 401 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 BRAFP15056 766 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 NFIXQ14938 502 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 CLYBLQ8N0X4 340 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 TRIM15Q9C019 465 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 PCSK1NQ9UHG2 260 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 PLA2G4CQ9UP65 541 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 SLC30A1Q9Y6M5 507 aa11.56□□□□□ -0.56
CACNA1C-216ENST00000399638 KITP10721 976 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 HSD17B4P51659 736 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 SYTL1Q8IYJ3 562 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ASPSCR1Q9BZE9 553 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 GPR63Q9BZJ6 419 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 MYO1CO00159 1063 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 STXBP3O00186 592 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 RANBP1P43487 201 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 AP2B1P63010 937 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 HLFQ16534 295 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 SLC45A4Q5BKX6 768 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ASAP3Q8TDY4 903 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 KIAA1586Q9HCI6 787 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ZBTB5O15062 677 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PLS3P13797 630 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PNPLA6Q8IY17 1366 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ESRRGP62508 458 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PLIN5Q00G26 463 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ZKSCAN8Q15776 578 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 DEPDC1Q5TB30 811 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 BTN2A1Q7KYR7 527 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 FAM133AQ8N9E0 248 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PPP1R36Q96LQ0 422 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PPM1LQ5SGD2 360 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 ITPRIPL1Q6GPH6 555 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 DDIASQ8IXT1 998 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 PKP3Q9Y446 797 aa11.55□□□□□ -0.56
CACNA1C-216ENST00000399638 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 PCSK7Q16549 785 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 KIZQ2M2Z5 673 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 SPATA1Q5VX52 437 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 STX19Q8N4C7 294 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 RIN2Q8WYP3 895 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 NDEL1Q9GZM8 345 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 TLR2O60603 784 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 NPTXRO95502 500 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 OLFML2BQ68BL8 750 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 FGD2Q7Z6J4 655 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■■ 45.2
CACNA1C-216ENST00000399638 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 TMEM161AQ9NX61 479 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 AGAP1Q9UPQ3 857 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 HMOX2P30519 316 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 LATS2Q9NRM7 1088 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 ADGRL3Q9HAR2 1447 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 ADD2P35612 726 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 NUMBP49757 651 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 CHSY1Q86X52 802 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 PNKPQ96T60 521 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 FDX1P10109 184 aa11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 SH3BGRP55822 239 aaPredicted RBP11.54□□□□□ -0.56
CACNA1C-216ENST00000399638 NBPF9Q3BBW0 867 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms