RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 TRIM27P14373 513 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 HTR1BP28222 390 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 PPM1AP35813 382 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 MEA1Q16626 185 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 THOC7Q6I9Y2 204 aaKnown RBP5.28□□□□□ -1.56
TTC3-204ENST00000399017 CCDC149Q6ZUS6 474 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 CENPUQ71F23 418 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 TRMT11Q7Z4G4 463 aaKnown RBP5.28□□□□□ -1.56
TTC3-204ENST00000399017 SLC7A14Q8TBB6 771 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 CEP95Q96GE4 821 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 SPATA9Q9BWV2 254 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 ADGRE3Q9BY15 652 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 IRF2BPLQ9H1B7 796 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 VPS16Q9H269 839 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 MROH8Q9H579 483 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 TRPM5Q9NZQ8 1165 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 CDC42BPBQ9Y5S2 1711 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 A0A087WZ62 844 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 ZSCAN5CA6NGD5 496 aaPredicted RBP5.28□□□□□ -1.56
TTC3-204ENST00000399017 PFKFB2O60825 505 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 PGK2P07205 417 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 HADHAP40939 763 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 CRLF3Q8IUI8 442 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 RNF168Q8IYW5 571 aaPredicted RBP5.28□□□□□ -1.56
TTC3-204ENST00000399017 PANX2Q96RD6 677 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 GPR63Q9BZJ6 419 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 AHSPQ9NZD4 102 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 PCDHB3Q9Y5E6 796 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 GAKO14976 1311 aa5.28□□□□□ -1.56
TTC3-204ENST00000399017 KIF24Q5T7B8 1368 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 H3BM21 787 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 MAN1A2O60476 641 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 GUCY1B2O75343 617 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CABYRO75952 493 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 KRT37O76014 449 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 SKILP12757 684 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 NFKB1P19838 968 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PSMA2P25787 234 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 SESN3P58005 492 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CHRNDQ07001 517 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 LRRC74AQ0VAA2 488 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 SCFD2Q8WU76 684 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CLCC1Q96S66 551 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 ESYT1Q9BSJ8 1104 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 BRD8Q9H0E9 1235 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 JPH1Q9HDC5 661 aaPredicted RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 CAPN2P17655 700 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 SERPINB10P48595 397 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 NDUFV1P49821 464 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PMS2P54278 862 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 YWHAZP63104 245 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 UGP2Q16851 508 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 OLFML2BQ68BL8 750 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 MYCBPAPQ8TBZ2 947 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 NELFBQ8WX92 580 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CAMKK2Q96RR4 588 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 ING2Q9H160 280 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PNMA6FA0A0J9YX94 578 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CEP104O60308 925 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 LRMPQ12912 555 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PDAP1Q13442 181 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 EIF4A2Q14240 407 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 ALKBH2Q6NS38 261 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 NECAB2Q7Z6G3 386 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 RASEFQ8IZ41 740 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 INTS2Q9H0H0 1204 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 DDX41Q9UJV9 622 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 METP08581 1390 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 NR2F2P24468 414 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 YWHAQP27348 245 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PDE1AP54750 535 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 BASP1P80723 227 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 EN1Q05925 392 aaPredicted RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 TFDP2Q14188 446 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 FOXR1Q6PIV2 292 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 POTEEQ6S8J3 1075 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PRUNE1Q86TP1 453 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PALB2Q86YC2 1186 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 C19orf60Q96EN9 201 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 LZTFL1Q9NQ48 299 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 DNAI1Q9UI46 699 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 KIAA0556O60303 1618 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 CLTCQ00610 1675 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 SCN8AQ9UQD0 1980 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 TDRD6O60522 2096 aaKnown RBP5.27□□□□□ -1.57
TTC3-204ENST00000399017 PRR23AA6NEV1 266 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 RBP3P10745 1247 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 RASA1P20936 1047 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 STX17P56962 302 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 OSTNP61366 133 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 C8orf34Q49A92 452 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 PACS1Q6VY07 963 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 FGD2Q7Z6J4 655 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 TMEM35BQ8NCS4 154 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 DENND1AQ8TEH3 1009 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 IDI2Q9BXS1 227 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 ZDHHC4Q9NPG8 344 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 LOXHD1Q8IVV2 1947 aa5.27□□□□□ -1.57
TTC3-204ENST00000399017 AOX1Q06278 1338 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms