RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 BIN1O00499 593 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 EXTL3O43909 919 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 NFICP08651 508 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
MBD1-207ENST00000398488 PRCPP42785 496 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 CYP2J2P51589 502 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 CLCNKBP51801 687 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 EFCAB13Q8IY85 973 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 NOC3LQ8WTT2 800 aaKnown RBP17.16■□□□□ 0.34
MBD1-207ENST00000398488 PLEKHA5Q9HAU0 1116 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 STXBP5LQ9Y2K9 1186 aa17.16■□□□□ 0.34
MBD1-207ENST00000398488 FSCN2O14926 492 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 KIF4AO95239 1232 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 SMC2O95347 1197 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 ZNF658Q5TYW1 1059 aaPredicted RBP17.15■□□□□ 0.34
MBD1-207ENST00000398488 ADGRD2Q7Z7M1 963 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 GPD1LQ8N335 351 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 GUF1Q8N442 669 aaKnown RBP17.15■□□□□ 0.34
MBD1-207ENST00000398488 RDH13Q8NBN7 331 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 CCDC47Q96A33 483 aaKnown RBP17.15■□□□□ 0.34
MBD1-207ENST00000398488 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 CCDC34Q96HJ3 373 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 B3GALT6Q96L58 329 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 FBXL18Q96ME1 805 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 GPR62Q9BZJ7 368 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 GZF1Q9H116 711 aaPredicted RBP17.15■□□□□ 0.34
MBD1-207ENST00000398488 CLSTN2Q9H4D0 955 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
MBD1-207ENST00000398488 PRUNE2Q8WUY3 3088 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 PPEF2O14830 753 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
MBD1-207ENST00000398488 PPM1AP35813 382 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 PMS1P54277 932 aaKnown RBP17.14■□□□□ 0.33
MBD1-207ENST00000398488 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 MORC3Q14149 939 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
MBD1-207ENST00000398488 KYAT1Q16773 422 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 UPP1Q16831 310 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 BRSK2Q8IWQ3 736 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 RNF168Q8IYW5 571 aaPredicted RBP17.14■□□□□ 0.33
MBD1-207ENST00000398488 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 TMEM169Q96HH4 297 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 PTPRJQ12913 1337 aa17.14■□□□□ 0.33
MBD1-207ENST00000398488 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 CASP4P49662 377 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 LMBRD2Q68DH5 695 aaPredicted RBP17.13■□□□□ 0.33
MBD1-207ENST00000398488 DDX53Q86TM3 631 aaKnown RBP17.13■□□□□ 0.33
MBD1-207ENST00000398488 VPS52Q8N1B4 723 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 LMAN2LQ9H0V9 348 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 PRDM6Q9NQX0 595 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 TLR9Q9NR96 1032 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 RMND1Q9NWS8 449 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 RBAKQ9NYW8 714 aaPredicted RBP17.13■□□□□ 0.33
MBD1-207ENST00000398488 LMCD1Q9NZU5 365 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
MBD1-207ENST00000398488 LZTS1Q9Y250 596 aa17.13■□□□□ 0.33
MBD1-207ENST00000398488 I3L4J1 428 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
MBD1-207ENST00000398488 PDXKO00764 312 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 BRCC3P46736 316 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 KRT17Q04695 432 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 UBE3AQ05086 875 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 ADSSL1Q8N142 457 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 XXYLT1Q8NBI6 393 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 MAFAQ8NHW3 353 aaPredicted RBP17.12■□□□□ 0.33
MBD1-207ENST00000398488 TCF25Q9BQ70 676 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 ADAM28Q9UKQ2 775 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
MBD1-207ENST00000398488 PPP1R3GB7ZBB8 358 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 PODXLO00592 558 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 LDHAP00338 332 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 NR3C1P04150 777 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 MCM4P33991 863 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 SNRPFP62306 86 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 SNRNP35Q16560 246 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 PTPROQ16827 1216 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 COBLL1Q53SF7 1204 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 SPATA1Q5VX52 437 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 FUT10Q6P4F1 479 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
MBD1-207ENST00000398488 ASB7Q9H672 318 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 PER2O15055 1255 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 LILRB3O75022 631 aa17.11■□□□□ 0.33
MBD1-207ENST00000398488 TADA2AO75478 443 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms