RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 HNRNPDLO14979 420 aaKnown RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 ADRB2P07550 413 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 LIG4P49917 911 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 CLCN4P51793 760 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 AMPD3Q01432 767 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 ALCAMQ13740 583 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 CLUL1Q15846 466 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 UPP1Q16831 310 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 SLFN12LQ6IEE8 588 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 TAS1R1Q7RTX1 841 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 AUTS2Q8WXX7 1259 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 ZBTB45Q96K62 511 aaPredicted RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 SNX27Q96L92 541 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 GPR62Q9BZJ7 368 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 TNMDQ9H2S6 317 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 CD320Q9NPF0 282 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 STYXL1Q9Y6J8 313 aa12.12□□□□□ -0.47
NDUFA9-202ENST00000396655 FRMD3A2A2Y4 597 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 MYMKA6NI61 221 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 K7ENM7 598 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 OGTO15294 1046 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 TEX28O15482 410 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 B3GAT3O94766 335 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 ALADP13716 330 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 PAX3P23760 479 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 CA8P35219 290 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 MTHFRP42898 656 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 POSTNQ15063 836 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 SLC10A6Q3KNW5 377 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 LLGL2Q6P1M3 1020 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 C15orf39Q6ZRI6 1047 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 RTL10Q7L3V2 364 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 CD302Q8IX05 232 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 CEP120Q8N960 986 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 CMASQ8NFW8 434 aaPredicted RBP12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 BICD1Q96G01 975 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 FBXL18Q96ME1 805 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 RIPOR3Q96MK2 946 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 PAAF1Q9BRP4 392 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 TTPALQ9BTX7 342 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 MAGEF1Q9HAY2 307 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 ANKFY1Q9P2R3 1169 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 ATP6V1DQ9Y5K8 247 aa12.11□□□□□ -0.47
NDUFA9-202ENST00000396655 TTC26A0AVF1 554 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 FAM86C2PA6NEL3 165 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 F8W810 466 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 FAM189A1O60320 539 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 PPP1R37O75864 691 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 KIF4AO95239 1232 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 EPCAMP16422 314 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 CYP3A5P20815 502 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 FGFR3P22607 806 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 OSTNP61366 133 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 ZBTB6Q15916 424 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 E2F4Q16254 413 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 FAM171A1Q5VUB5 890 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 LILRA6Q6PI73 481 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 ZMAT2Q96NC0 199 aaKnown RBP12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 SFXN1Q9H9B4 322 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 EXOC7Q9UPT5 735 aa12.1□□□□□ -0.47
NDUFA9-202ENST00000396655 MTCL1Q9Y4B5 1905 aaKnown RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 A0A087X0B3 334 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 C2CD2LO14523 706 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 XPOTO43592 962 aaKnown RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 GLUD1P00367 558 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 NMT1P30419 496 aaKnown RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 MATR3P43243 847 aaKnown RBP eCLIP12.09□□□□□ -0.471e-8■■□□□ 12.6
NDUFA9-202ENST00000396655 CLCNKBP51801 687 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 PKP1Q13835 747 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 BECN1Q14457 450 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 GLRA4Q5JXX5 417 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 TMEM31Q5JXX7 168 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 RESP18Q5W5W9 173 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 GPR149Q86SP6 731 aa12.09□□□□□ -0.47
NDUFA9-202ENST00000396655 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms