RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 CYP24A1Q07973 514 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 ZBTB6Q15916 424 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 HABP4Q5JVS0 413 aaKnown RBP17.82■□□□□ 0.44
AP1S3-202ENST00000396653 GLRA4Q5JXX5 417 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 GPR153Q6NV75 609 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 NOC3LQ8WTT2 800 aaKnown RBP17.82■□□□□ 0.44
AP1S3-202ENST00000396653 KIF12Q96FN5 646 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 UROC1Q96N76 676 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 DUSP9Q99956 384 aaKnown RBP17.82■□□□□ 0.44
AP1S3-202ENST00000396653 PLVAPQ9BX97 442 aa17.82■□□□□ 0.44
AP1S3-202ENST00000396653 COL4A4P53420 1690 aaPredicted RBP17.82■□□□□ 0.44
AP1S3-202ENST00000396653 C5orf67F2Z3F1 127 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 RB1P06400 928 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 CCDC192P0DO97 292 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 EPB41P11171 864 aaKnown RBP17.81■□□□□ 0.44
AP1S3-202ENST00000396653 PPM1AP35813 382 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 MCCD1P59942 119 aaPredicted RBP17.81■□□□□ 0.44
AP1S3-202ENST00000396653 TMEM132DQ14C87 1099 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 SPOUT1Q5T280 376 aaKnown RBP17.81■□□□□ 0.44
AP1S3-202ENST00000396653 JADE1Q6IE81 842 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 INTS8Q75QN2 995 aaKnown RBP17.81■□□□□ 0.44
AP1S3-202ENST00000396653 USP37Q86T82 979 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 ZNF280BQ86YH2 543 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 COLGALT1Q8NBJ5 622 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 FAM212AQ96EL1 285 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 ZNF558Q96NG5 402 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 FUCA2Q9BTY2 467 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 HCSTQ9UBK5 93 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 PLXNA4Q9HCM2 1894 aa17.81■□□□□ 0.44
AP1S3-202ENST00000396653 SOX1O00570 391 aaPredicted RBP17.8■□□□□ 0.44
AP1S3-202ENST00000396653 B4GALT3O60512 393 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 ZC3H11AO75152 810 aaKnown RBP eCLIP17.8■□□□□ 0.44
AP1S3-202ENST00000396653 AKAP3O75969 853 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 FGFR1OPO95684 399 aaKnown RBP17.8■□□□□ 0.44
AP1S3-202ENST00000396653 NFICP08651 508 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 BMPR1AP36894 532 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 WNT7BP56706 349 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 BCAR1P56945 870 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 STX17P56962 302 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 SPATA1Q5VX52 437 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 KCNT2Q6UVM3 1135 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 FILIP1Q7Z7B0 1213 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 WDR49Q8IV35 697 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 EFCAB13Q8IY85 973 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 CSGALNACT2Q8N6G5 542 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 RDH13Q8NBN7 331 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 TMC2Q8TDI7 906 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 FNBP1Q96RU3 617 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 CGRRF1Q99675 332 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 PDE11AQ9HCR9 933 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 DNAJB4Q9UDY4 337 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 PCDHB12Q9Y5F1 795 aa17.8■□□□□ 0.44
AP1S3-202ENST00000396653 SYCE3A1L190 88 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 GNA14O95837 355 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 GALTP07902 379 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 LRPAP1P30533 357 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 CTNNB1P35222 781 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 SLC11A1P49279 550 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 ALDH7A1P49419 539 aaKnown RBP17.79■□□□□ 0.44
AP1S3-202ENST00000396653 CLDN10P78369 228 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 ZSCAN23Q3MJ62 389 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 PARD3BQ8TEW8 1205 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 CACTINQ8WUQ7 758 aaKnown RBP17.79■□□□□ 0.44
AP1S3-202ENST00000396653 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
AP1S3-202ENST00000396653 MED15Q96RN5 788 aa17.79■□□□□ 0.44
AP1S3-202ENST00000396653 METTL14Q9HCE5 456 aaKnown RBP17.79■□□□□ 0.44
AP1S3-202ENST00000396653 ALDH2P05091 517 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 KRT13P13646 458 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 RPL9P32969 192 aaKnown RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 AP3M2P53677 418 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 SOX4Q06945 474 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 SPAG1Q07617 926 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 BFSP1Q12934 665 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 EPC2Q52LR7 807 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 C11orf57Q6ZUT1 292 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 ENOX1Q8TC92 643 aaKnown RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 BORCS6Q96GS4 357 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 ANKRD36BP1Q96IX9 119 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 C17orf80Q9BSJ5 609 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 C11orf84Q9BUA3 381 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 NAT10Q9H0A0 1025 aaKnown RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
AP1S3-202ENST00000396653 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 INTS13Q9NVM9 706 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 TUBGCP4Q9UGJ1 667 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 FAN1Q9Y2M0 1017 aa17.78■□□□□ 0.44
AP1S3-202ENST00000396653 CASTOR2A6NHX0 329 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 NRP1O14786 923 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 TMEM191BP0C7N4 346 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 OR1G1P47890 313 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 VAMP7P51809 220 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 MARSP56192 900 aaKnown RBP17.77■□□□□ 0.44
AP1S3-202ENST00000396653 PLCB3Q01970 1234 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 ZNF697Q5TEC3 545 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 FRMD5Q7Z6J6 570 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms