RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 ICA1LQ8NDH6 482 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 ASAP3Q8TDY4 903 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 MKNK1Q9BUB5 465 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 CYP4F11Q9HBI6 524 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 TCP11X1B4DZS4 312 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 MTMR2Q13614 643 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 TBCCQ15814 346 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 TTC23LQ6PF05 361 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 TRIM51Q9BSJ1 452 aa18.29■□□□□ 0.52
UBFD1-201ENST00000395878 RAD23BP54727 409 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 NCOA4Q13772 614 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 LBRQ14739 615 aaKnown RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 RAD9BQ6WBX8 426 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 SLC30A5Q8TAD4 765 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 TEX12Q9BXU0 123 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 AGAP1Q9UPQ3 857 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 UBA6A0AVT1 1052 aaPredicted RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PSMD3O43242 534 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 RAD51Q06609 339 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PGBD4Q96DM1 585 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PRMT1Q99873 361 aaKnown RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 ATP9BO43861 1147 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 RBBP8NLQ8NC74 664 aaPredicted RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PPHLN1Q8NEY8 458 aaKnown RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 CNTNAP5Q8WYK1 1306 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 DFFAO00273 331 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 MYO1DO94832 1006 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 TMEM253P0C7T8 217 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 MYBP10242 640 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PDHBP11177 359 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 PDGFRAP16234 1089 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 RASA1P20936 1047 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 ACTN3Q08043 901 aaPredicted RBP18.28■□□□□ 0.52
UBFD1-201ENST00000395878 AGBL2Q5U5Z8 902 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 MFSD14CQ5VZR4 134 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 SLC26A7Q8TE54 656 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 CPA5Q8WXQ8 436 aa18.28■□□□□ 0.52
UBFD1-201ENST00000395878 P4HA2O15460 535 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 PDHA1P08559 390 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
UBFD1-201ENST00000395878 SULT1E1P49888 294 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.52
UBFD1-201ENST00000395878 TRAPPC11Q7Z392 1133 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 YY1AP1Q9H869 796 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 PTPRUQ92729 1446 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 NEMP1O14524 444 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 ACOT2P49753 483 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.52
UBFD1-201ENST00000395878 KCNA1Q09470 495 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 BAATQ14032 418 aaPredicted RBP18.27■□□□□ 0.52
UBFD1-201ENST00000395878 TRADDQ15628 312 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 RNF135Q8IUD6 432 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 CEP70Q8NHQ1 597 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 ARHGEF26Q96DR7 871 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 SGSM3Q96HU1 749 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 KLC4Q9NSK0 619 aa18.27■□□□□ 0.52
UBFD1-201ENST00000395878 SERPINB9P50453 376 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 SESN2P58004 480 aaPredicted RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 CUL3Q13618 768 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 TAS2R42Q7RTR8 314 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 KIRREL3Q8IZU9 778 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 SYN2Q92777 582 aaPredicted RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 C19orf81C9J6K1 198 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 CAMTA2O94983 1202 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 HIC1Q14526 733 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 SZRD1Q7Z422 152 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 DDIASQ8IXT1 998 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 TMEM143Q96AN5 459 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 OLFM3Q96PB7 478 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 TRIM45Q9H8W5 580 aaPredicted RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 KLHL11Q9NVR0 708 aa18.27■□□□□ 0.51
UBFD1-201ENST00000395878 PSMC3IPQ9P2W1 217 aaPredicted RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 FARP1Q9Y4F1 1045 aaPredicted RBP18.27■□□□□ 0.51
UBFD1-201ENST00000395878 C3orf70A6NLC5 250 aaPredicted RBP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 CPB1P15086 417 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 RFC5P40937 340 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 CATSPER1Q8NEC5 780 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 SEPT1Q8WYJ6 367 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 RIT2Q99578 217 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 TEKT2Q9UIF3 430 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 ZNRF3Q9ULT6 936 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 SMAPO00193 183 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 CHN1P15882 459 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 PGM1P36871 562 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 ZNF473Q8WTR7 871 aaKnown RBP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 RMDN2Q96LZ7 410 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 SMARCAD1Q9H4L7 1026 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 RBM12Q9NTZ6 932 aaKnown RBP18.26■□□□□ 0.51
UBFD1-201ENST00000395878 HNRNPCL2B2RXH8 293 aa18.26■□□□□ 0.51
UBFD1-201ENST00000395878 GYPCP04921 128 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms