RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TAS1R1Q7RTX1 841 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 ADGRD2Q7Z7M1 963 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 VPS52Q8N1B4 723 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 AGPAT3Q9NRZ7 376 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 MAPK8IP1Q9UQF2 711 aa18.01■□□□□ 0.47
CXCL1-201ENST00000395761 CARNS1A5YM72 827 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 EFEMP2O95967 443 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 WNT7BP56706 349 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 TIGD5Q53EQ6 642 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 TCEAL5Q5H9L2 206 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 CD300LGQ6UXG3 332 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 SPATA20Q8TB22 786 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 HASPINQ8TF76 798 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 NOC3LQ8WTT2 800 aaKnown RBP18■□□□□ 0.47
CXCL1-201ENST00000395761 AUTS2Q8WXX7 1259 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 TCF25Q9BQ70 676 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 NSUN3Q9H649 340 aaKnown RBP18■□□□□ 0.47
CXCL1-201ENST00000395761 HSPBP1Q9NZL4 362 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 TUBGCP4Q9UGJ1 667 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 MYO7AQ13402 2215 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 TRIP11Q15643 1979 aa18■□□□□ 0.47
CXCL1-201ENST00000395761 EXTL3O43909 919 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 KIF4AO95239 1232 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 SMC2O95347 1197 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 ZBTB6Q15916 424 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 UPP1Q16831 310 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 PLPP4Q5VZY2 271 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 JADE1Q6IE81 842 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 TMC7Q7Z402 723 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
CXCL1-201ENST00000395761 GPD1LQ8N335 351 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 KIF12Q96FN5 646 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 GPR62Q9BZJ7 368 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 ZBP1Q9H171 429 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 KCTD10Q9H3F6 313 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 PRDM6Q9NQX0 595 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 ENTPD7Q9NQZ7 604 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 SLC38A7Q9NVC3 462 aa17.99■□□□□ 0.47
CXCL1-201ENST00000395761 HOOK1Q9UJC3 728 aaKnown RBP17.99■□□□□ 0.47
CXCL1-201ENST00000395761 HIDE1A8MVS5 230 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 TULP1O00294 542 aaPredicted RBP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 TADA2AO75478 443 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 LDHAP00338 332 aaKnown RBP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 NFICP08651 508 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 CYP2J2P51589 502 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 GUCY2FP51841 1108 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 POU5F1Q01860 360 aaKnown RBP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 CAMK4Q16566 473 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 KLHL40Q2TBA0 621 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 FUT10Q6P4F1 479 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 DCLRE1AQ6PJP8 1040 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 HS2ST1Q7LGA3 356 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 CBWD2Q8IUF1 395 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 CD302Q8IX05 232 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 B3GALT6Q96L58 329 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 GSDMAQ96QA5 445 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 NGRNQ9NPE2 291 aaKnown RBP17.98■□□□□ 0.47
CXCL1-201ENST00000395761 ADAM28Q9UKQ2 775 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 CITO14578 2027 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
CXCL1-201ENST00000395761 PODXLO00592 558 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 PER2O15055 1255 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 CXCL14O95715 111 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 SNRPFP62306 86 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 HYAL1Q12794 435 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 RBM23Q86U06 439 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 BRSK2Q8IWQ3 736 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 GUF1Q8N442 669 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 DDX27Q96GQ7 796 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 FAM84AQ96KN4 292 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 UROC1Q96N76 676 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 IGFLR1Q9H665 355 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 ASB7Q9H672 318 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 RMND1Q9NWS8 449 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 RBAKQ9NYW8 714 aaPredicted RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 MAN1B1Q9UKM7 699 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 UBQLN1Q9UMX0 589 aaKnown RBP17.97■□□□□ 0.47
CXCL1-201ENST00000395761 COL6A3P12111 3177 aa17.97■□□□□ 0.47
CXCL1-201ENST00000395761 REV3LO60673 3130 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 C2orf71A6NGG8 1288 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 KIAA0391O15091 583 aaKnown RBP17.96■□□□□ 0.47
CXCL1-201ENST00000395761 B3GAT3O94766 335 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 SOD2P04179 222 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 CTSAP10619 480 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 RPL9P32969 192 aaKnown RBP17.96■□□□□ 0.47
CXCL1-201ENST00000395761 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.47
CXCL1-201ENST00000395761 TMEM132DQ14C87 1099 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 ZNF658Q5TYW1 1059 aaPredicted RBP17.96■□□□□ 0.47
CXCL1-201ENST00000395761 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 EFCAB13Q8IY85 973 aa17.96■□□□□ 0.47
CXCL1-201ENST00000395761 XXYLT1Q8NBI6 393 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms