RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 HERC6Q8IVU3 1022 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 CPA5Q8WXQ8 436 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 MRPL38Q96DV4 380 aaKnown RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 TGS1Q96RS0 853 aaKnown RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 AS3MTQ9HBK9 375 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 RXFP1Q9HBX9 757 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 CWC25Q9NXE8 425 aaPredicted RBP6.63□□□□□ -1.35
AP3S1-202ENST00000395548 CLDND1Q9NY35 253 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 RTEL1Q9NZ71 1219 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 FBLN5Q9UBX5 448 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 RABGAP1Q9Y3P9 1069 aa6.63□□□□□ -1.35
AP3S1-202ENST00000395548 PTPRFP10586 1907 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 OTOL1A6NHN0 477 aaPredicted RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 FFAR3O14843 346 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 STRNO43815 780 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 DDAH1O94760 285 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 NTRK1P04629 796 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 PMLP29590 882 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 HOXC12P31275 282 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 KCNC1P48547 511 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 CCL23P55773 120 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 ERVK-21P61565 698 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 ERICH6BQ5W0A0 696 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 JAZF1Q86VZ6 243 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 DCP2Q8IU60 420 aaKnown RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 FAM126BQ8IXS8 530 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 TP53I13Q8NBR0 393 aaPredicted RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 CYP2W1Q8TAV3 490 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 FNIP1Q8TF40 1166 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 CCDC140Q96MF4 163 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 MAGEC2Q9UBF1 373 aaPredicted RBP6.62□□□□□ -1.35
AP3S1-202ENST00000395548 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
AP3S1-202ENST00000395548 NBEAQ8NFP9 2946 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 TNKSO95271 1327 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 LOC730098B7Z3J9 87 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 FOXD2O60548 495 aaPredicted RBP6.61□□□□□ -1.35
AP3S1-202ENST00000395548 HIBADHP31937 336 aaKnown RBP6.61□□□□□ -1.35
AP3S1-202ENST00000395548 ETFBP38117 255 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 E4F1Q66K89 784 aaPredicted RBP6.61□□□□□ -1.35
AP3S1-202ENST00000395548 TMEM105Q8N8V8 129 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 FEZF2Q8TBJ5 459 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 PLEKHO2Q8TD55 490 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 MORC4Q8TE76 937 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 FRS2Q8WU20 508 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 MRFAP1L1Q96HT8 127 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 SEZ6LQ9BYH1 1024 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 AP5M1Q9H0R1 490 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 MARCH2Q9P0N8 246 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 TSPYL4Q9UJ04 414 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
AP3S1-202ENST00000395548 USP9XQ93008 2570 aaPredicted RBP6.61□□□□□ -1.35
AP3S1-202ENST00000395548 PHIPQ8WWQ0 1821 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 C19orf81C9J6K1 198 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 SUSD5O60279 629 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 FRAT2O75474 233 aaPredicted RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 TAF5LO75529 589 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 CPP00450 1065 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 CD4P01730 458 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 ITGAVP06756 1048 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 AKR1A1P14550 325 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 ICAM3P32942 547 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 MC3RP41968 323 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 CLCN5P51795 746 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 RPL11P62913 178 aaKnown RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 MBLAC2Q68D91 279 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 ZDHHC14Q8IZN3 488 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 ZGPATQ8N5A5 531 aaKnown RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 CXorf38Q8TB03 319 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 BTN2A2Q8WVV5 523 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 PCDH18Q9HCL0 1135 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 HYPKQ9NX55 129 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 CHPF2Q9P2E5 772 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 MTUS1Q9ULD2 1270 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 R3HCC1Q9Y3T6 440 aaKnown RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 TIMM13Q9Y5L4 95 aaPredicted RBP6.6□□□□□ -1.35
AP3S1-202ENST00000395548 COL4A3BPQ9Y5P4 624 aa6.6□□□□□ -1.35
AP3S1-202ENST00000395548 LOC285556D6RIA3 1793 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 COL4A4P53420 1690 aaPredicted RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 HELZ2Q9BYK8 2649 aaKnown RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 C22orf46C9J442 243 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SNAP23O00161 211 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 TAF4O00268 1085 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 ENTPD3O75355 529 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 MAP4K4O95819 1239 aaPredicted RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SNRPB2P08579 225 aaKnown RBP6.59□□□□□ -1.35
AP3S1-202ENST00000395548 ADORA2AP29274 412 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 KCNJ6P48051 423 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SLURP1P55000 103 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 BACE1P56817 501 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 SHC2P98077 582 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 KCNAB2Q13303 367 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 ANGPT1Q15389 498 aa6.59□□□□□ -1.35
AP3S1-202ENST00000395548 PTPN21Q16825 1174 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms