RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 OSBPL8Q9BZF1 889 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 IP6K2Q9UHH9 426 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PCDHA10Q9Y5I2 948 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 NUDT17P0C025 328 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 TBXAS1P24557 533 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 CNGA1P29973 690 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 BBS9Q3SYG4 887 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 ERMARDQ5T6L9 678 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 FOXP3Q9BZS1 431 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 VCXQ9H320 206 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 SENP1Q9P0U3 644 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 ZHX2Q9Y6X8 837 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 LOC102724159A0A0B4J2E5 919 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 SLURP2P0DP57 97 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PYGMP11217 842 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PWP2Q15269 919 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PLA2G4FQ68DD2 849 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PDIK1LQ8N165 341 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 SREK1Q8WXA9 508 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 IDI2Q9BXS1 227 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 PPP1R12CQ9BZL4 782 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 NEUROG2Q9H2A3 272 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 NRBP2Q9NSY0 501 aa12.4□□□□□ -0.42
UBE2D3-209ENST00000394804 WDR91A4D1P6 747 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 SPAG7O75391 227 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 MT-ND3P03897 115 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 CALB1P05937 261 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 CENPCQ03188 943 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 LMBRD2Q68DH5 695 aaPredicted RBP12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 FUKQ8N0W3 1084 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 ATG4AQ8WYN0 398 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.43
UBE2D3-209ENST00000394804 FAM47DPA6NHR8 397 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 NOP56O00567 594 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 MCF2LO15068 1137 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 SHBGP04278 402 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ARL4CP56559 192 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 SESN3P58005 492 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 BASP1P80723 227 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ERICH1Q86X53 443 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 HSD17B14Q9BPX1 270 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ANKRD36CQ5JPF3 1778 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 PSMD10O75832 226 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 MAPTP10636 758 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 JAM2P57087 298 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 PHLDB3Q6NSJ2 640 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 VAV3Q9UKW4 847 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 TMX2Q9Y320 296 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 RARAP10276 462 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 RALAP11233 206 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ARSEP51690 589 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 P3H1Q32P28 736 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 AADACL2Q6P093 401 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 SLFN11Q7Z7L1 901 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 PRELID2Q8N945 189 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 GPRC5CQ9NQ84 441 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 ANKEF1Q9NU02 776 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 PARVAQ9NVD7 372 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 AGO2Q9UKV8 859 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
UBE2D3-209ENST00000394804 H7C0C1 242 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 ATP5OP48047 213 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 RIBC1Q8N443 379 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 ALG3Q92685 438 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PI4K2AQ9BTU6 479 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 POLR3FQ9H1D9 316 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 RNF146Q9NTX7 359 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PCYOX1Q9UHG3 505 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PCDHA3Q9Y5H8 950 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 IGF2BP3O00425 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 DRD4P21917 467 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 MAGEA4P43358 317 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 KRT81Q14533 505 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 RILPQ96NA2 401 aa12.38□□□□□ -0.43
UBE2D3-209ENST00000394804 TUBB6Q9BUF5 446 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms