RNA–Protein interactions for RNA: ENST00000394547.7

TRPT1-203, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRPT1, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-203ENST00000394547 PRG3Q9Y2Y8 225 aaPredicted RBP20.71■□□□□ 0.91
TRPT1-203ENST00000394547 DERAQ9Y315 318 aa20.71■□□□□ 0.91
TRPT1-203ENST00000394547 COL6A3P12111 3177 aa20.71■□□□□ 0.91
TRPT1-203ENST00000394547 TMEM189-UBE2V1I3L0A0 370 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 EFEMP2O95967 443 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 CYP3A5P20815 502 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 ACOT2P49753 483 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 GPD1LQ8N335 351 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 GUF1Q8N442 669 aaKnown RBP20.7■□□□□ 0.9
TRPT1-203ENST00000394547 BCL7CQ8WUZ0 217 aaPredicted RBP20.7■□□□□ 0.9
TRPT1-203ENST00000394547 SMARCE1Q969G3 411 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 DDX27Q96GQ7 796 aaKnown RBP20.7■□□□□ 0.9
TRPT1-203ENST00000394547 ADAM28Q9UKQ2 775 aa20.7■□□□□ 0.9
TRPT1-203ENST00000394547 UBQLN1Q9UMX0 589 aaKnown RBP20.7■□□□□ 0.9
TRPT1-203ENST00000394547 FSD2A1L4K1 749 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 CASTOR2A6NHX0 329 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 LACTBL1A8MY62 500 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 GOLGA6L22H0YM25 854 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 IL18RAPO95256 599 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 COBLL1Q53SF7 1204 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 NT5DC4Q86YG4 428 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 BRSK2Q8IWQ3 736 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 RNF168Q8IYW5 571 aaPredicted RBP20.69■□□□□ 0.9
TRPT1-203ENST00000394547 TCF25Q9BQ70 676 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 FAM213AQ9BRX8 229 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 ZBP1Q9H171 429 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 HSPBP1Q9NZL4 362 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 C2CD2Q9Y426 696 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 PCDHA5Q9Y5H7 936 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 PRRC2BQ5JSZ5 2229 aaKnown RBP20.69■□□□□ 0.9
TRPT1-203ENST00000394547 REV3LO60673 3130 aa20.69■□□□□ 0.9
TRPT1-203ENST00000394547 PDXKO00764 312 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 SOD2P04179 222 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 CTSAP10619 480 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 RPL9P32969 192 aaKnown RBP20.68■□□□□ 0.9
TRPT1-203ENST00000394547 ERVFC1P60507 584 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 SMC1AQ14683 1233 aaKnown RBP20.68■□□□□ 0.9
TRPT1-203ENST00000394547 ZBTB6Q15916 424 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 UPP1Q16831 310 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 ZNF658Q5TYW1 1059 aaPredicted RBP20.68■□□□□ 0.9
TRPT1-203ENST00000394547 MICALL1Q8N3F8 863 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 SAAL1Q96ER3 474 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 KIF12Q96FN5 646 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 FBXL18Q96ME1 805 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 HERC2P3Q9BVR0 1158 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 KCTD10Q9H3F6 313 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 ENTPD7Q9NQZ7 604 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 RBAKQ9NYW8 714 aaPredicted RBP20.68■□□□□ 0.9
TRPT1-203ENST00000394547 IRAK3Q9Y616 596 aa20.68■□□□□ 0.9
TRPT1-203ENST00000394547 SF3B1O75533 1304 aaKnown RBP eCLIP20.68■□□□□ 0.98e-6■■■■■ 107
TRPT1-203ENST00000394547 NCK2O43639 380 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 KIF4AO95239 1232 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 LRPAP1P30533 357 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 IRS1P35568 1242 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 CLCNKBP51801 687 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 SOX4Q06945 474 aaPredicted RBP20.67■□□□□ 0.9
TRPT1-203ENST00000394547 ELAVL2Q12926 359 aaKnown RBP20.67■□□□□ 0.9
TRPT1-203ENST00000394547 MYBPC2Q14324 1141 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 FUT10Q6P4F1 479 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 DCLRE1AQ6PJP8 1040 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 TMC7Q7Z402 723 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 SLC9A9Q8IVB4 645 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 GPR65Q8IYL9 337 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 VPS52Q8N1B4 723 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 XXYLT1Q8NBI6 393 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 PAAF1Q9BRP4 392 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 VN1R3Q9BXE9 311 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 PCIF1Q9H4Z3 704 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 LMBRD1Q9NUN5 540 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 TRAF3IP3Q9Y228 551 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 SSX2IPQ9Y2D8 614 aa20.67■□□□□ 0.9
TRPT1-203ENST00000394547 PODXLO00592 558 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 TADA2AO75478 443 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 TMEM132DQ14C87 1099 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 NFIL3Q16649 462 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 TCEAL5Q5H9L2 206 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 BEST2Q8NFU1 509 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 MICAL1Q8TDZ2 1067 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
TRPT1-203ENST00000394547 CDCA3Q99618 268 aaPredicted RBP20.66■□□□□ 0.9
TRPT1-203ENST00000394547 GOLGA2P5Q9HBQ8 144 aa20.66■□□□□ 0.9
TRPT1-203ENST00000394547 ZNF233A6NK53 670 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 CALUO43852 315 aaPredicted RBP20.65■□□□□ 0.9
TRPT1-203ENST00000394547 PPP1R2P41236 205 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 SURF1Q15526 300 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 SPATA1Q5VX52 437 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 PLPP4Q5VZY2 271 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 JADE1Q6IE81 842 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 ZSWIM2Q8NEG5 633 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 FAM212AQ96EL1 285 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 TUBGCP4Q9UGJ1 667 aa20.65■□□□□ 0.9
TRPT1-203ENST00000394547 GOLGA8IPA6NC78 632 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 GOLGA8JA6NMD2 632 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 F8W810 466 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 CLIC2O15247 247 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 TRAPPC3O43617 180 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 B3GAT3O94766 335 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 URODP06132 367 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 NFICP08651 508 aa20.64■□□□□ 0.89
TRPT1-203ENST00000394547 PAX3P23760 479 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms